Pseudomonas chlororaphis PCL1606, PCL1606_RS08215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.640.10 | - | IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | 1 | 252 | 7.9E-86 |
| Pfam | PF01041 | DegT/DnrJ/EryC1/StrS aminotransferase family | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 20 | 367 | 3.8E-110 |
| CDD | cd00616 | AHBA_syn | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 24 | 368 | 0.0 |
| SUPERFAMILY | SSF53383 | PLP-dependent transferases | IPR015424 | Pyridoxal phosphate-dependent transferase | 20 | 371 | 1.55E-101 |
| PIRSF | PIRSF000390 | PLP_StrS | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 4 | 373 | 1.7E-100 |
| FunFam | G3DSA:3.40.640.10:FF:000089 | Aminotransferase, DegT/DnrJ/EryC1/StrS family | - | - | 6 | 253 | 8.6E-96 |
| Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | 254 | 373 | 3.3E-30 |
| PANTHER | PTHR30244 | TRANSAMINASE | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | 21 | 370 | 2.1E-94 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.