Pseudomonas chlororaphis PCL1606, PCL1606_RS05620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004222 | metalloendopeptidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01435
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0006508 | proteolysis |
Inferred from Sequence Model
Term mapped from: InterPro:PF01435
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR22726 | METALLOENDOPEPTIDASE OMA1 | - | - | 32 | 268 | 2.6E-57 |
| Pfam | PF01435 | Peptidase family M48 | IPR001915 | Peptidase M48 | 73 | 256 | 6.9E-32 |
| Coils | Coil | Coil | - | - | 68 | 88 | - |
| Gene3D | G3DSA:3.30.2010.10 | Metalloproteases ("zincins"), catalytic domain | - | - | 65 | 160 | 1.9E-10 |
| CDD | cd07331 | M48C_Oma1_like | - | - | 78 | 261 | 3.43565E-82 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.