Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCAAGCCCGCCCTGGCGATGCGCTGGCACCAGGCACAGCTGCGCCTGCCGGTGCTCGGGCGAGTCATCCAGGCCAGCAACAGCACCCGTTTCGTCAGCAC CCTGGCGATTCTCGGGCGCAGTGGCGTGCCTTTGGTTGATGCCCTGGAGATCTCCGCCGAGGTGGTGGCCAACCAGCAGATTCGTACTCGTATGAAAGAC GTGGCGCGTGCGGTGCGCGAAGGTAGCGGGCTGACCCGGGCCCTGGAACAGAGCGGCGATTTCCCGCCGATGATGCTGTACATGATCGCCAGCGGCGAAC GCTCGGGGGAACTGGACAGCATGCTCGAACGCGCCGCCCACCAGCAGCAGACCCAACTGTCCAACGGCATCGCCATGCTGGTCGGCCTGTTCGAGCCGGC GATGCTGGTGTTCATGGGCGCCAGCGTGCTGGTGATCGTCCTGGCGATCCTGATGCCGATTCTCAACCTCAACCAACTCATCACCTGAAGAGCACACAAC
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DNA Sequence for Gene |
>PCL1606_RS05380
ATGCGCAACCTTTCCCGCCAACGCGGCTTCACCCTGATCGAGATCATGGTGGTCGTGGTGATCCTCGGGGTCCTGGCCGCCCTGGTCGTCCCGCAGATCA TGAGCCGTCCCGACCAGGCCAAGGTCACCGCCGCCCGCAGCGACATCAAGGCGGTCGCCACGGCCCTGGAAATCTACAAGCTCGACAACCATCACTACCC GTCCACCCAGCAGGGCCTGGAAGCCCTGGTGAAAAAACCGGCCGGCATGCCCGCGGCCCTCAACTGGAACCCCGACGGCTACCTCAAGCGGCTGCCCAAG GATCCCTGGGGCAACCCTTACCAGTTCATCGCCCCGGGCCGCGAAGGCACGCCCTACGACCTGTACTCCTTCGGCGCCGATGGCCGCAGCGGCGGCGAAG GCACCAACGCCGACATCGGTAACTGGCAACCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCAAGCCAATGGCCGGGTTCACCTTGCTCGAGCTGCTGGTGGTCATGGTGATCGTCGGCCTGCTCGCCGGCCTGGTCGGACTGGTGCAGAGCGACGC CGGCGGGCAGCAGACCCGGCGCGAGGCCGAGCGCCTGCAGAACCTCATTGGCCTGCTGCGCGAAGACGCGGTGCTGAACAGCGTCAGCCACGGCCTGCGC CTGGAGCCGGACCGCTACGCGGTGCTGAGCCTCGACCGCAGCGGCCAGTGGCAAGCCGACCGACGCTTCAAGGAACACCGGCTGCCCGGCGAATTGCGCC TGAACCTGCAAGACCCGCAACCCCGTGTGCAGAACGCGGAGCCGCAAGTGTGGGTCCTGCCCGACGACCAGCTCTCGGCCTTCAGCCTGCTGCTCGAATA CCGCCAGCAGCCGCTGCTGTCGCTGTCCAGTGACGGTGTCGAGGAGGTGCGCCTTGCCCCGGTGCAATGAACAGGCGGGCTTCACCCTGCTCGAAGTGAT
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Amino Acid Sequence |
>secretion system protein G
MRNLSRQRGFTLIEIMVVVVILGVLAALVVPQIMSRPDQAKVTAARSDIKAVATALEIYKLDNHHYPSTQQGLEALVKKPAGMPAALNWNPDGYLKRLPK DPWGNPYQFIAPGREGTPYDLYSFGADGRSGGEGTNADIGNWQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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