Pseudomonas chlororaphis PCL1606, PCL1606_RS05200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain PCL1606, complete genome. [Details]
DNA Sequence Upstream of Gene
TCGACGATGTCCACCAGGCGGTCGGTCATCACCGCTTCGATGCTCAGGTCCGGGTATTGCTCGGTCAGGCGGCCGATCAGCGGCATCACCACCTTGCGTC CGAACAGCGACGGCGTGCTGATCTTCAGCAGCCCGGTGGGCGAGTCGCGGCGGTCCAGCAGCAGGCTTTCGGTCTGCGCCAGTTCGGCCAGCAGCGGCGT GGCGCGATCCACCAGCAGCTTGCCATCCGGGGTCAGGCTGACACTGCGGGTATTGCGTTGCAGCAGGCGCACGCCCAACTGCTGCTCCAGGCGCGAAATA GCCCGCGACAGGCCGGACTGGGTCAGCCGCAGGTCGCCGGCGGCGCGGGTGAAACTGCGGGTCTCGGCGACCCGGACCAGCAAGCGAACGGCGTTCAGAT CCATGATTAAAGTCATCACTGAAAGAGCGATGACGGTATTTATCATCTATTCGGCATCAAAGAAACTGAGGCCCTGATTTTCCGTACAAGGACCGCCGCA
DNA Sequence for Gene
>PCL1606_RS05200
ATGCCCGTCACTTCCTCTGCCGCGCCCTCGGGCCGGATGCTGTTCCTGCTGGCGTGCGCGCAGCTGATCATCGCCCTGGACGCAACCATCGTGTTTGTCG CCTTGCCGGACATCGGCCGCCACCTGGGGTTTTCCGCGCAACAGTTGCAGTGGGTGGTCAGTGCCTACAGCGTGGCCTTCGGCGGCTTCCTGCTGCTGGG CGGTCGGGCGGCCGACCTGTTGGGCAAGCGCCGTTTCTACATCGTCGGGCAAAGCCTGTACGCCCTGGCGTCGCTGGCCGGTGGCCGGGGCGGCAGCGCC CTGTTGCTGGTGCTGGCGCGGGCGGTGCAGGGTGTCGGCGGGGCCCTGTTGTTCCCGGCGACGCTGGCGCTGATCAACAGCCATTACCCCGAGGGGCCGG CGCGCAACCGCGCGTTCGCCGTCTGGAGCGCTGCCTCGGCCGCGGGCCTGGCGCTGGGGGCGTTGCTCGGTGGCGTGCTGACCCAGTGGTGGGGCTGGGA AGCGGTGTTTCTGGTCAACGTACCCCTGGCGGGGGCCTGTGCCTTGCTGGCCCGGCGCTGGATCGCGGCCGATGGCGAGCGTGAGCGCGGGCGGCGCTTC GACCTCGCCGGCGCCCTGACCGTGACGGTGGGCGGCACGCTGCTGGTGTTCGCCATCGTCCAGGGGCCGGAGTGGGGCTGGAGCGCTCCGCCGACCCTGG GCTGCGCGGCCCTGGCGCTGATCCTGCTCGGCCTGTTCGCCGTGATCGAGCGGCGTGGCCGCGACCCGCTGATGCCGTTGCGCCTGCTGGCCCATCGCGA GCTGCGCCTGGCGATGTTTCTCACCGCCCTGTTCATGAGCAGCTTCGGCGTGCAGTACTACTTCCTGGCCTTGTACTTCCAGCAGGTCTACGGCTACAGC GTGCTGCAAAGCGGTGTGGCGTTCTTGCCGGCGACCTTGCTGTGCACCCTGGGCATCTGGCTGGCCGAGCGTTCGCTGCTGCGTTTCGGTCTGCGCGGGA CCCTGGCCGGCGGCCTGCTCCTGGGGGCGCTGGGCATTGGCGGGGTGTACGTGGCGCTACCCGATGGGGCGGGGTTCTGGAGCCTGATGCCGGGCATCGT GGTGCTGAGCATCGGTCAGGGCATGACCTGGACCGCCATGTGGGTCTCGGCCGGTCAGGGTATCGCGCCGGGCGAGCAGGGTGTCGCGGCGGGCATCGCT TCCACCAGCCAGCAGATCGGCGGCGCGCTGGGGCTGGCGCTGCTGGTGTCCCTGGCCAACGCCGGGCTGGGCGGTTCGCCGGCGGCTGGCATCGAGCAGG CGGTAGGCGCCAGCGCCTTGCTCGCTCTGCTGGGCGCGGTATTGGCGTTGCGCTTGCGCACACCGACGGCGCGGGGCCTGCAAGCCGCGGCCGAGCGCGC TTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTCCGGGCGCCAACGCACTACCCATGGCCCCGTAGCCGCTGTCGAGCCTTGGCGAGGCTGCGATCGACTGCGCAGCAGTCGCAAAACCAGGCACCGCGT TTAGCCAGTCAGATCGCAAGCACAGCCTTGGCGAGGACGCTGTCCTCGATCGCCGCCTCGCCCGGGCTCGGCAGCGGCTACGCAAGAGCGTCAGCGCTAA GCGCGGAACACCTCAGATCCACACATCGTTGGCAGCCGTGCGTTCGCCGTCTTCGTCGCCGGTATTGCGCACGCCCTTGGGTTCGATCAACAGCAACTTG ACCTCCTGCTCGGCATACGGCTTGTGCTTCACGCCCTTGGGCACGACAAACATCTCGCCCTGGTTGAGCGTCACCTGGCCGTCGGCAAAGTCGATGCGCA ACTGGCCTTCGAGCACGATGAAGGTCTCGTCGGTGTGCTGATGGTCGTGCCAGATGAAGTCCCCTTGCAGCTTCACCAGCTTGAACTGGTAGTCGTTCAT
Amino Acid Sequence
>MFS transporter
MPVTSSAAPSGRMLFLLACAQLIIALDATIVFVALPDIGRHLGFSAQQLQWVVSAYSVAFGGFLLLGGRAADLLGKRRFYIVGQSLYALASLAGGRGGSA LLLVLARAVQGVGGALLFPATLALINSHYPEGPARNRAFAVWSAASAAGLALGALLGGVLTQWWGWEAVFLVNVPLAGACALLARRWIAADGERERGRRF DLAGALTVTVGGTLLVFAIVQGPEWGWSAPPTLGCAALALILLGLFAVIERRGRDPLMPLRLLAHRELRLAMFLTALFMSSFGVQYYFLALYFQQVYGYS VLQSGVAFLPATLLCTLGIWLAERSLLRFGLRGTLAGGLLLGALGIGGVYVALPDGAGFWSLMPGIVVLSIGQGMTWTAMWVSAGQGIAPGEQGVAAGIA STSQQIGGALGLALLVSLANAGLGGSPAAGIEQAVGASALLALLGAVLALRLRTPTARGLQAAAERA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site