Strain | Pseudomonas chlororaphis strain PCL1606, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCCAGCAAGGTGGTGTGCATGGAAGTGCTGGAGCACATCGAACAGCCCGAGCCGTTCCTCGCCGAGCTGGTGCGCATGGGCCGCCCGGGCGCGCAGTACC TGATCAGCGTTCCGGACCCGGTGGGCGAGCATTTGCAGAAGGGCATCGCGCCGCCTGGCTATTACCGTGCGCCGAACCATGTGCAGATCTTTTCCCGCGA GGATTTTGCCCGGCTGGTCGAGGACGCCGGGCTGGTCATCGAGCACCGCCAGGCCACGGGCTTTTTCTGGGTCATGGGGATGATCTTTTTCTGGGCCAGC GAGCGGGCTGCGGGGCGCGAACCGCCGGGCGCGGTGCGCGACCGCATCCAGGCGCCATACCCGGCGCTGATGGAAGGCTGGGCGCGGACCTGGGAAGAGC TGCTGGCACAGCCCGACGGGCTGGCGATCAAGCAGGTGCTGGACGGCTTCATGCCCAAAAGCCAGGTCATCATCGCGCGCAAGCCCCTGGCGCAGCCGTC
|
|
DNA Sequence for Gene |
>PCL1606_RS00080
TTGAACGACAAGCGGATCCTGGACATCGAGCTGCTGCGCGGCATCGCGGTGCTGGGCGTGGTGTTCCACCATCTGCAGGGCAATCTGTTTCCCGACGGGC TTGCCTGGCTGGGCAGCGTCGCGGCCTACGGCCAGTTCTGGTGGGGCGTGGATTTGTTCTTCGCCATCTCCGGCTTTGTCATCGCCCGCAGCCTGATCCC GCAATTGCGCACCTGCAGCAGCACCGCGCAGGCCTGGCAACGGACCCGCGACTTCTGGATTCGCCGCGCCTTTCGCCTGCTGCCTTCGGCGTGGCTGTGG CTGCTGCTGACGTTGCTGGCGAGCCTGGCGCTCAATCGCTCGGGGGCCTTCGGCAGCCTGCACGCCAACCTGTGGGCCACCGTGGCCGGCCTGTTGCAGT TCGCCAATCTGCGTTTCGCCGACAGCTTCTTCCACTACGAGTACGGCGCCAGCTTCGTCTACTGGAGCCTGGCGCTGGAGGAGCAGTTCTACCTGTTGCT GCCGCTGCTGGTGCTGCTGTGTCGCAAGTACCTGGCCTGGGTGTTGCTGGCGTTGGTGCTGGTGCAAGTCCTGACGATGCGCACGCCGCTGCTGATGGTC ATCCGCACCGATGCCATGGCCCTGGGCGTGCTGCTGGCGCTGTGGACGGCCCGCGCCAGCTACCGGTACTGCGAACCGAAGTGGCTGGGGCGCCATCCGG GGTTCGGCCCGCTGCTGTTGCTGCTGGCTGGCCTGGGCCTGGGCTGGCTGGCCACCGACGGCTTCGCGATCACCCATTACCGGGTCGGCGCGCTGGCTCT GCTGTGCGCGCTGCTGGTGTGGATCGCCTCCTACAACCGTGACTACCTGTTGCCCCGCGGTCCGTTGAAGAGCCTGCTGGCCTGGGTCGGCAGCCGTTCC TACGGGCTCTACCTGATCCACATCCCGGCGTTCCTGCTGGTGCGCGAAGCCTGGTTCCGCCTGGCGCCTTCGGGCACGCCCGGGCTGGCCGAGCAGCCGC TGCTGGCGCTGGGCTGCGCCGCGGGCCTGCTGCTGTTGCTGAGCGAACTCAATTACCGGATCGTCGAGCTGCCCCTGCGCAATAGAGGTGCCGAGCTGGT GCAACGCCTGGGGCCATCCCGTTCTCCCGTTCCTTCCACTGGAGTCACTTCATGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCTTCTGAAAAAACTCACGGCGAGCGCTCCTGCGGCCGTAACGCCCGATACACCGCCGCCGGCCAAGGTCGACCCGTACATGCTGGGCCTGCAGGACGC GATGCTCAGCGGCTGGTTCAACCAGGAAAACGGCGAGCTGTTCACCGGCTTCCCGGTGACGGCCGAGGACACCTTGCTCGACGTCGGCTGCGGCGATGGC GGCAATGTGCATTACTGCGCGATGCGCGGGGCGAAGATCATCATTGCCGATATCGACGCGGCCAAGGTCGAGGCCACGCGCCAGCGCCTGAGCGACACCC CGGCGCGCAGCGTCGAATGCCATGTCACCGACTGCAATCCGCTGCCGATCGCCGATGGCACCGCCAGCCGCGTGGTGTCCACCGAGGTCATCGAGCACGT GGACGACCCGGCGCAGTTTCTTTCCGAGCTGGTGCGGGTCGGCCAGCCGGGCGCGTTGTACCTGCTGAGCGTGCCGCACCCGAGCTCCGAGGACCTGCAG
|
|
Amino Acid Sequence |
>acyltransferase
MNDKRILDIELLRGIAVLGVVFHHLQGNLFPDGLAWLGSVAAYGQFWWGVDLFFAISGFVIARSLIPQLRTCSSTAQAWQRTRDFWIRRAFRLLPSAWLW LLLTLLASLALNRSGAFGSLHANLWATVAGLLQFANLRFADSFFHYEYGASFVYWSLALEEQFYLLLPLLVLLCRKYLAWVLLALVLVQVLTMRTPLLMV IRTDAMALGVLLALWTARASYRYCEPKWLGRHPGFGPLLLLLAGLGLGWLATDGFAITHYRVGALALLCALLVWIASYNRDYLLPRGPLKSLLAWVGSRS YGLYLIHIPAFLLVREAWFRLAPSGTPGLAEQPLLALGCAAGLLLLLSELNYRIVELPLRNRGAELVQRLGPSRSPVPSTGVTSC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|