Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS02915

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGCTCGCCTGCCGCGAACGCAGCACCTTCATCCCGATCCTGGCCAACAGCTTCGCCCGCCACACCACCGAGGTGCTGGTGAACCACGCCGAGCGTGAAC ACGGCGATTCCAAGTACAGCCCGATGCGCCTGATCAACCTGATGTTCGACCTGATCACCTGCATGACCACCACGCCGCTGCGCCTGCTGAGCATCATCGG TTTCAGCATGGCCGGCCTCGGCGTGCTGTTCGCCCTGCTGCTGATTTTCCTGCGCCTGGTGTTCGGCGCCGAATGGGCCGGCGACGGTATGTTCGTGCTG TTCGCCATCCTGTTCGTGTTCACCGGTGGCCAGTTCATCGGCATGGGCCTGCTGGGCGAATACCTGGGCCGCATGTACAGCGATGTGCGCGCTCGCCCGC GCTTCTTCATTGAAAAAGTTCTGCGCAGCCAGCCTGCCGCCCCTGCTCCCGCTGTCACGGTCGACGGTCTAACTTCCACTCTCTCCGATCAGGTTTCGCC
DNA Sequence for Gene
>PCH03S_RS02915
ATGAGTCATAAAGCTGTTGTCTTCGCCTATCACGATATCGGCTGCGCAGGCATCGAAGCCCTGCTCAATGCAGGCTATGAAATCGGCGCGGTCTTCACCC ATGCCGACGATCCGCAGGAAAACACCTTCTACGGCTCCGTGGCCCAGTTGTGCTCGCTCAAGGGCATCCCGGTGCATGCCCCGGAGGACGCCAACCACCC GCTGTGGATCGAGCGCATCGCCAAGCTGAAGCCTGACTACATCTTCTCCTTCTACTATCGCAACCTGCTCAGCGAAGCGCTGCTGGCCACCGCCAGCAAA GGCGCGTTCAACCTGCACGGTTCGCTGCTGCCGAGCTACCGTGGCCGCGCGCCGGCCAACTGGGTGCTGGTCAACGGCGAAAGCGAAACCGGCGTGACCC TGCACCGCATGGTCAAGCGCGCCGACGCCGGGGCGATCATTGCCCAGCAGCGGGTGGCCATCGAGCGCAGCGATACCGCGCTAAGCCTGCACGGCAAGCT GCGCGACGCCGCCACCAGCCTGCTGCGCGACACCCTGCCCGCCCTGGCGCAAGGCAAGGTCAGCGAAACCGCCCAGGACGAATCCAGGGCCAGCTACTTC GGTCGCCGCACCGCGGCCGACGGCAAGTTGCTGTGGAGCAAACCGGCCGAGCAACTGTTCAACCTGGTGCGCGCCGTGACCAAGCCTTACCCGGGCGCGT TCTGCGCCGTGGGCGAGCACAAGCTGATCGTCTGGAGCGCCGAAGTGGTCAAGGGCAACGAAGGCCAGGCCCCGGGCCGGGTGATCAGCGTCGACCCGCT GCGCATCGCCTGTGGCCAGGACTCGCTGCTGATCAACGCCGGCCAGCGTAACGACAACGGCCTGTATCTGAGCGGCCCGCAACTAGCCAACGAACTGGGC CTGGTGGATGGCTCGCTGCTGCGCGGCGCCGAATCCGGCCGCACCCCGCGACGCACCCGGGTGCTGATCCTTGGCGTCAACGGTTTTATCGGCAATCACC TGTCCGAGCGCCTGCTGCGTGACGACAAGTACGAGGTCTACGGCCTGGATATCGGCTCCGACGCCATCGAGCGCCTGCGCAGCCATCCGCACTTCCACTT CGTCGAAGGCGACATCAGCATTCACTCCGAATGGATCGAGTACCACATCAAGAAGTGCGACGTGGTCCTGCCGCTGGTGGCCATCGCCACCCCGATCGAA TACACCCGCAACCCGCTGCGCGTGTTCGAGCTGGACTTCGAAGAGAACCTCAAGCTGGTCCGCTACTGCGTCAAGTACAACAAGCGCGTGATCTTCCCGT CGACCTCCGAGGTCTACGGCATGTGCCAGGACCAGAACTTCGACGAAGACACTTCCAACCTGATCGTCGGCCCGATCAACAAGCAGCGCTGGATCTACTC GGTATCCAAGCAGTTGCTGGACCGGGTGATCTGGGCCTACGGCAGCAAGGGCCTGAACTTCACCCTGTTCCGTCCGTTCAACTGGATGGGCCCGCGCCTG GACCGCCTGGACTCGGCGCGCATCGGCAGCTCCCGGGCCATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACGCCGATCCGCCTGTTCGACGGTGGAG AGCAGAAACGCTGCTTCACCGACATCGCCGACGGCATCGAGGCCCTGGCGCGCATCGTCGACAACGAAAACGATGTGTGCAACGGCCAGATCATCAACAT CGGCAACCCGGACAACGAAGCCAGCATCCGCCAGTTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCCCACCCGCTGCGTGGCAACTTCCCGCCGTTCGCC GGTTTCCGCGACGTCGAGAGCAAGTCGTTCTACGGCGCCGGCTACCAGGACGTGGAACACCGCAAACCGCGCATCGCCAACGCCAAGCGCCTGTTGAACT GGGAACCGACCGTCGAGATGAAGCAAACCATCGGCAACACGCTGGACTTCTTCCTGCGCGAAGCCATGCTCGAAATCGCGGAGCCCTCTAAAGAAGAAGC ATGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAGGCAGGTCTGCGAATCGATGTCGACACCTATCGCGGCACCCGTGAGGGGGTGCCGCGGTTGCTGGAACTGCTCGATGAAGCCGGGATCAAGGCCAC CTTCTTCTTCAGCGTCGGCCCGGACAACATGGGGCGCCACCTGTGGCGCCTGATCCGTCCGCAATTTCTGTGGAAGATGCTGCGCTCCAACGCCGCCGGC CTGTATGGCTGGGACATCTTGCTGGCGGGCACCGCCTGGCCGGGCAAGCCGATCGGCCGCGACCTCGGACACCTGATGCGTCAGGCCCGGGACGCCGGTC ATGAAGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAATGCCGGGCGCTGGAACCAGGCGCAGCTGATCGAGCAGATTCGCCAGGGCGTCGA CACCCTCAATGACATTCTCGGCCAGCGCATCGACTGTTCGGCGGCCGCCGGCTGGCGCGCCGACGAGTCGGTGATCGCAGCCAAGCAGGGCTTCGGCTTT
Amino Acid Sequence
>UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSHKAVVFAYHDIGCAGIEALLNAGYEIGAVFTHADDPQENTFYGSVAQLCSLKGIPVHAPEDANHPLWIERIAKLKPDYIFSFYYRNLLSEALLATASK GAFNLHGSLLPSYRGRAPANWVLVNGESETGVTLHRMVKRADAGAIIAQQRVAIERSDTALSLHGKLRDAATSLLRDTLPALAQGKVSETAQDESRASYF GRRTAADGKLLWSKPAEQLFNLVRAVTKPYPGAFCAVGEHKLIVWSAEVVKGNEGQAPGRVISVDPLRIACGQDSLLINAGQRNDNGLYLSGPQLANELG LVDGSLLRGAESGRTPRRTRVLILGVNGFIGNHLSERLLRDDKYEVYGLDIGSDAIERLRSHPHFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDQNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGSKGLNFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDVCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGNFPPFA GFRDVESKSFYGAGYQDVEHRKPRIANAKRLLNWEPTVEMKQTIGNTLDFFLREAMLEIAEPSKEEAC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site