Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS08535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAAGCTGCTGTTGGCCGGTCAGGACCTGAGCACCATCAGCAATGCGCAGATTCCGTTCCTGCGGCGGCAGATCGGCGTGGTGTTCCAGAACCACCAGC TGCTGTTCGATCGCACCGTTTTCAACAATGTCGCCTTGCCGCTGCAGATCCTCGGCCTGTCCAAGGCCGAAATCGCCAAGCGCGTGGACTCGGCCCTGGA GCGCGTGGCGCTCTCGGACAAGACCGATCTTTACCCGGGCGACCTGTCCACCGGTCAGCAGCAGCGCGTCGGCATTGCCCGCGCCATCGTGCACCGCCCG GCCTTGCTGCTGGCGGACGAACCCACAGGTAACCTCGACCCGCGTCTGGCGGCGGAAATCATGGGCGTATTCGAAGATATCAACCGTCTGGGCACCAGCG TGCTGATCGCCAGTCACGACCTGGCGCTGATCGCGCGCATGCGCCACCGCATGCTGACCCTGCAACGCGGCCGATTGATCGGCGACGGGGAGGCTAGCGT
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| DNA Sequence for Gene |
>PCH03S_RS08535
ATGAGTGCGACCCGCAGCCCTAAAGTGGCCGAACGCGTGGCTCCGAAAGCCCCGGATCAACCGCCGCAGAAGAAAAAACGCGACGAAGACGACGGTCCGG ATTTCAGCACCCTGCTGCACGCCTGGATCGAAAGCCATCGCGCCAGCCTGCTCGACAGCCTGCGTCGCCTGGGCAAGCAGCCGATCGGCAGTTTCTTCAC CTGCCTGGTGATGGCCGTGGCCCTGAGCCTGCCGATGGGCTTATCGTTGTTGCTCAACAACGTCGAGCGCCTGGGTGGCTCCTGGCAGCGCGCGGCGCAG ATTTCCCTGTACCTGGAACTCGACGCCAGCGCCACCGAGGGCGAAAGCCTGAGTGAGCAGATCAAGGCCATGCCGGGCGTGGCGGATGCCGAGTTCATCA GCAAGGACAAGGCCCTGGACGAGTTCCAGCAGCAGTCCGGGCTGGGCGAGGCGCTCAAGGAGTTGCCGCAGAACCCGCTGCCGGGCGTGGTCCTGGTCAC GCCGAACGAAGTGGACAAGGCGACCCTGGAAACCTTGCGCCAGCGCCTGGCGGAAATGCCCAAGGTGCAGCAGGCGCAACTGGACCTGGTGTGGGTCGAG CGGCTGGCGGCGATCCTCAAGCTGGGCGACCGGTTTGTCTTCGGCCTGACGGTGTTACTGGTTTCTGCATTACTTTTGGTGATAGGCAATACCATTCGTC TTCATATTGAAAACCGCCGCACCGAGATAGAAGTGATTAAACTCGTCGGCGGCACGGACAGTTATGTACGGCGTCCCTTCCTTTATATGGGCGCCTTGTA TGGCTTCGGTGCGGGGATTCTGTCCTGGGGTGTTCTGGCGTTCGGCCTCGACTGGCTGAACGACGCGGTAGTGGGGTTGGCCGGCTTGTACGGCAGTGAT TTCGCCCTGGCTGGCGTGCCGGTCGCCGATGGTCTATCACTCTTGCTTGGCGCGGTGTTGTTGGGGTATATCGGTGCGTGGATTGCGGTGGCCCGTCACT TGCGGGAGCTGGCGCCGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTCTTTTTGCTTGTATTGACCTTTTAGAATTTTTGGGAACTTGTTTTGTGGTTCCCGGTCAATTTTCAGCAGTGCTGAATAAGCACGAGTTATGTGAGT CGGAGGTTTTTTCGTATGACCACTTCTTTGCAACCTGCTTATGCCTTGGTCCCGGGTGCGAACCTGGAGGCCTATGTGCACACGGTGAACAGCATTCCAT TGCTGACGCCCGAGCAGGAGCGTGAACTGGCCGAGAGTCTCTACTATGAGCAGGATCTTGAGGCGGCTCGGCAGATGGTGCTCGCCCACCTGCGTTTTGT CGTACATATCGCCCGTAGCTATTCCGGCTACGGTCTGGCCCAGGCCGACCTGATTCAGGAAGGCAACGTCGGCCTGATGAAGGCTGTAAAACGCTTCAAC CCGGAAATGGGTGTGCGTCTGGTTTCGTTCGCCGTGCACTGGATCAAGGCGGAAATCCACGAGTTCATCCTGCGCAACTGGCGCATCGTGAAAGTCGCGA
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| Amino Acid Sequence |
>cell division protein FtsX
MSATRSPKVAERVAPKAPDQPPQKKKRDEDDGPDFSTLLHAWIESHRASLLDSLRRLGKQPIGSFFTCLVMAVALSLPMGLSLLLNNVERLGGSWQRAAQ ISLYLELDASATEGESLSEQIKAMPGVADAEFISKDKALDEFQQQSGLGEALKELPQNPLPGVVLVTPNEVDKATLETLRQRLAEMPKVQQAQLDLVWVE RLAAILKLGDRFVFGLTVLLVSALLLVIGNTIRLHIENRRTEIEVIKLVGGTDSYVRRPFLYMGALYGFGAGILSWGVLAFGLDWLNDAVVGLAGLYGSD FALAGVPVADGLSLLLGAVLLGYIGAWIAVARHLRELAPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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