Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS08370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGACCATCCTCGGCGATGGCCGGGTGGTGTTGATCCTCGATCTGCTGGCGCATATCCGCGCCCTGCAAACGCGTTTGCCGGTGCCACGCATGGCGGTC GGCGATGAAGTGAGCCCCGAGGTCGAACCGCTGCGGCCGAGGCTGGTGCTGGTGGTCGACGACTCGGTGACGGTGCGCAAGGTTACCAGCCGCCTGTTGG AACGCCACGGCATGAACGTGTTGACTGCCAAGGACGGGGTCGACGCCATGGCGCTGCTGCAGGAGCACACCCCGGACCTGATGCTGCTGGACATCGAAAT GCCACGCATGGACGGCTTCGAGGTGGCGATGCAGGTGCGCGCCGACCCACGCCTGCAACAGCTGCCGATCATCATGATCACCTCGCGCACCGGCCAGAAA CACCGCGACCGAGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCTTACCAGGAGTCGGTGCTGCTGGAGAGCATCGCCCAGTGGAGCAGACCCC
DNA Sequence for Gene
>PCH03S_RS08370
ATGCATGACTACCGCGCCAGCTTCCTCACCGGACTGCTGCTGCCCCTGGCCGACCGCACCCTGATCCTGCCCAACGTCGCGGTGGCCGAACTGATCGACT ACCAGCGCGGCGAACCCGCCAGCGACGCGCCGCCCTGGTACCTGCGCTCCGTGGCCTGGCGCGACCGTCAGTTGCCGCTGATCAGCTTCGAGGCTGCCTG CGGCCAGCCCCTCGCCATCGGCGAACGCGCCCGCATCGTGGTGCTCAACACCCTGGGCGGCCGTGAGCGCCTGAAGTTCATCGCCCTGGTGATCCAGGGT ATCCCGCGTTCCTGCCGGCTCGACAGCCAGCTGAGCTACGTCGACGTGCCGCTGTGCCGGCTGGAAAAGGCCGCGGTGCAGGTGGGGGAGCAGGTGGCGA AGATTCCGGATCTGTTGGGGTTGGAGGAGATGCTGGTGAAGGCGGGGTTGTCTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCTGTCGAGCGGCTTGATCGTTCCCTATTTGGGACTGATGGGGCGCCACTGATCTGTAGGAGCGAGGCTTGCCCGCGATGGCGTCCGTGCTGGCGCTG CATTTTTTGGACGGTGTACATATCCGTTTCTGCGGTCACGGCTACTTAGGGTTCCGCCCTTACGGCGGGTCACTTTTGGCAAACGCCCCAAAAGTAACCA AAAGGTCTTGCCCCTGCGTACGGCCTTCGCTGCGCTCAGGTTCCCTCGCTCCGGTGTCCATCAGGGGGCATCGACTCCGGTCGGCTTCGCTTCGACCTCC ATACGATGTCCTCGACTACGTCGAGGGGCGCTGCGCGCCATCCCCCTGATGAACACCTCCGCTCGGCCTCCCGATGGGGCGGGTGGATCAAGATCAAAAA CCAAAGCCAAAGCCAAACGCGACCTGCCGGTCGACGCGAAACTCTGTAGCCGCTGCCGAGCCTGCGAGGCTGCGATCGACTGCGCAGCAGGCGCAGGGTT
Amino Acid Sequence
>chemotaxis protein
MHDYRASFLTGLLLPLADRTLILPNVAVAELIDYQRGEPASDAPPWYLRSVAWRDRQLPLISFEAACGQPLAIGERARIVVLNTLGGRERLKFIALVIQG IPRSCRLDSQLSYVDVPLCRLEKAAVQVGEQVAKIPDLLGLEEMLVKAGLS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site