Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS13750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTGGGGTACTGGAACATCAGTCCGGAACGCTTCCTCGACAAGCCGGTCGCGCAGGTCGACGAAAGCGCCATCGACTACTACGCCATCAACGCCCGT AGCGTGCAGTACCTGCCCGACGGCAAGCTGCAGTACGAAATGACGTCCGACAAGGTCGAACACCTCAAGGCCACCGAGGTGACACTGTTGACCAAGCCGG ACCTGCAGATGTATCGCGGCACCGCCTTCCCCTGGCACGTCCAGAGCGAGCACGGCGAAGTCAACCCGGATGGCACCCAGGTCGAGCTGATCGATTCGGT ACGGGTTTCGCGCACCGACGAGAAAAATCGCAACCTGCTGATCACCACGACCCGCATGACAGTATTCCCGCAGAAGCAATATGCGCAGACCGATCAAGAC GTTAGAATCGACGGCGCCGGCGGCGTGACGACTGGCAAGGGAATGAAAGCGTATTTGAAAGACGGCAGGATGAACCTGCTATCGAACGTAAGAGGACAGT
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| DNA Sequence for Gene |
>PCH03S_RS13750
ATGAGGCTCGTTAAAACCCTCCCTATTTTGCTCGGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGCCAGCAACCAATCC GCATCCAGGCCGACGACGCTCAACTGGACGACAAGAATGGCGTAGCCACCTACAGGGGCGACGTGATCATCACCCAGGGCTCGATGAAGGTCACCGGCAA TACCGTGACCATCACCCGCACCCAGACCGGTGACATCGACGTGGTGACTTCGGTGGGCAACCTGGCCTACTTCGAGCAGATCCAAACCCAGGGCGATACC AAGCCGGTCCAGGGCTATGGCGTGACCATCCAGTATCACGCTGCGCAGAACCGCGTCGTGCTGATCGACCGCGCCAAGGTCGTCGATAAGGACGGCAACA TCACCCAGGGCGAGAAAATCGTCTACGACACCAACAAGAAGCTGGCCAGCGCCGGTCGCGCTACCGGCAGCAAGGTCACCGAGTCGCGCCCACGGATCGA CATGGTCATCCAGCCGAAAAAGAAAACTGACGAAAAGGCCCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGCAACTCTGAAAGCTCAGCACCTGGCCAAGAGCTACAAGAGCCGCCAGGTCGTGCGTGATGTCAGCCTGTCCATCGACAGCGGCCAGATCGTCGGCCT GCTCGGCCCCAACGGCGCCGGCAAGACCACTTGCTTCTACATGATCGTCGGCCTGGTCCAGGCCGATCAGGGTCGTATCCTGATCGACGACCTGGATGTC AGCCACCAGCCAATGCACGGCCGTGCCCGCGCCGGGATCGGCTACCTGCCGCAGGAAGCCTCGATCTTCCGCAAGCTCTCGGTGGCCGACAACATCATGG CCATCCTCGAGACCCGCAAGGAACTCGACAAGGCCGGCCGTCGCCAGGAACTGGAAAGCCTGCTGCAGGAATTCCACATCAGCCATATTCGCGACAACCT GGGCATGAGCCTTTCCGGCGGTGAACGTCGCCGCGTGGAAATCGCTCGCGCACTGGCCACCGCCCCCAAGTTCATCCTGCTCGACGAACCCTTCGCCGGC
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| Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRLVKTLPILLGLGAALGSVSAWALPNDSQQPIRIQADDAQLDDKNGVATYRGDVIITQGSMKVTGNTVTITRTQTGDIDVVTSVGNLAYFEQIQTQGDT KPVQGYGVTIQYHAAQNRVVLIDRAKVVDKDGNITQGEKIVYDTNKKLASAGRATGSKVTESRPRIDMVIQPKKKTDEKAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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