Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS16150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAGATCCGCAACGTGGCGGACACGCCCATCGTCATCCTCACCGCCAAGGAAGACGACCTGGACCATATCCTGGGCCTGGAGTCCGGCGCCGACGACTA CGTGATCAAGCCGATCAAGCCGGCGGTGCTGCTGGCCCGCCTGCGCGCCCTGCAACGGCGCCAGTTGCCGGAGCCGACGGTGCGCGGCGCGCTGGAATTC GGCCGCCTGACCCTCGACCGCAGCTGCCGCGAAGTGCGCCTGGCCGGCGAGCCGATCGAGCTGACCACCATGGAGTTCGAGCTGCTATGGCTGCTGGCCA GTTCGGCGGGCAAGATCCTCTCCCGCGACGACATCCTCAACCGCATGCGCGGCATCGCCTTCGACGGCCTCAACCGCAGCGTCGATGTCTACATCAGCAA GCTGCGCGGCAAACTCCAGGACAACCCTCGCGAGCCGGTGTGCATCAAGACCATCTGGGGCAAGGGCTATCTGTTCAATCCGTTCGCGTGGGAGCTCTAG
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| DNA Sequence for Gene |
>PCH03S_RS16150
ATGCTGCGGCTGTTTCTGGGTTTGTACATTGTCCTGGCCATAGGTTTTGCCGGGGCGATCACCGCGGTCGATCACATCTTCACGGCCATCCTCGAAGACC CGCTGGAAGCCTACAACCGCGATGCGGTGCGCGGGCCGGCTTATAGCCTGGTGGAACAGTTGCGGCCGTTCGACAGCGCCGAGCGCGAACGGCAATTGCA GGCGTTGCAGCCGCACTACGGCTTGCAGTTGCGCCTGGTGAACGCCGACGCGCTGGGCCTGAGCGCCCGCGAACAGGCCTTGCTGGCCTCCAACCAGTTG GTGGTGCGGCAAGCGTTCACCGAGTTTATCGCCAGCATCGACCAGGGCCCGCAATTGCTAAGCATCAAGTTGCCGGAAGAGCCCTCGCTGACCCGCTTCT ATACCACCGCGGCCTATTTTCTCCTCGCTACGCTGGTGGGCATCGTCCTGTATTTCTGGGTGCGCCCGCACTGGCGCGATCTGGAGCAACTGCGGCTGGC GGCCGAACGGTTCGGCGACAACGACCTGAGTACGCGCCTGCACCTGTCGCGGCGCTCGAACATTCGCGAGCTGGCCGAGCACTTCAACCGCATGGCCAGC CGCATCGAAGGCCTGATCGCCAATCAGCGCGAGCTGACCAACGCGGTGTCCCATGAGCTGCGCACGCCCATCGCCCGCCTGTCGTTCGAACTCGACCAGC TCAAGCAGTCCGATCCGAAACACAACCGCGAGTTGATCGCCGACATGTACGCCGACCTCGGCGAGCTGGAGGAAATGGTCTCCGAACTGTTGACCTATGC CAGCCTGGAACACGGCGCCACGGTGATCAACCGCGAGACTATCCAGGCCCACAGCTGGCTCGACAGCGTGGTCGGCAGTGTCGCCCTGGAGGCGGAAGCG GCGGGGGTACAGATCCTGATCCGCGCCTGCGAGGTCGAGTGCATCAGCATCGAGCCGCGGTTCATGGCGCGGGCGGTGATCAACCTGCTGCGCAACGCCA TTCGCTACGCCGAGCGGCGCGTCGAGGTGTCCCTGGTGCGGGTCGGGCAGGGTTATGAAGTCCAGGTCAACGACGACGGCCCGGGCGTGCCGGTGGAAGG GCGCAAGAAAATCTTCGAGCCGTTCTCCCGGCTCGACGCCAGCCGCGACCGCCGCACCGGCGGCTTCGGCCTTGGCCTGGCGCTGGTGCGGCGGGTGTCG CAGTCCCACGGCGGCCAGGTCGAGGTGACGGATTCGCAGTGGGGCGGCGCGTCGTTTCGCATGACCTGGGCGCAGGTCGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCGGCCCATAGGCACATACCCGCGGAATTGCGCATGCTTCTGTAGGAGCGCAGCTTGCGCGCGATGAACGATAACGCGGTGGATCAGGCGGTCCGCGT CGTGGTCATCGCGGGCAAGCCTCGTTCCTACAGAAGCACGCGGTTCTGTAGGAACGAGCGGGCGGCGATCCGACTTGCCCGCGATAGCGTCAGAACGACC AACGCCGCTTAGAAGCTGTACTCCAGCGTGGTCGCCAACGACGTCTGCAGCCGCCGCTCGACAATCGGGCTGTCCGCCGCCTCCCGCCCCAGGTACTGCA GCGCCAGTACCGTCGACACGTTCATCTGTTCACTGACCGGCACTGTCCAGGTCAGGTCGCCGCCACGGCTGAGAAAACCGCCCTTGGGCCGATAGGCTGC AAAACGGGTCTTGCCGGCCTGGGCCGTGCTGACGCCATACCAGGTGCGCAGGTAGTCGCCGTCACCGAACTGGCTGTTGAGGCTGCCTTCGAGGCGGCCG
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| Amino Acid Sequence |
>ATPase
MLRLFLGLYIVLAIGFAGAITAVDHIFTAILEDPLEAYNRDAVRGPAYSLVEQLRPFDSAERERQLQALQPHYGLQLRLVNADALGLSAREQALLASNQL VVRQAFTEFIASIDQGPQLLSIKLPEEPSLTRFYTTAAYFLLATLVGIVLYFWVRPHWRDLEQLRLAAERFGDNDLSTRLHLSRRSNIRELAEHFNRMAS RIEGLIANQRELTNAVSHELRTPIARLSFELDQLKQSDPKHNRELIADMYADLGELEEMVSELLTYASLEHGATVINRETIQAHSWLDSVVGSVALEAEA AGVQILIRACEVECISIEPRFMARAVINLLRNAIRYAERRVEVSLVRVGQGYEVQVNDDGPGVPVEGRKKIFEPFSRLDASRDRRTGGFGLGLALVRRVS QSHGGQVEVTDSQWGGASFRMTWAQVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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