Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS22240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCCCGGCGCAACCGGATCATCAGTGGCCTGTCCCTTGGCGTGCTGGTGGTGGAGGCCAGCGTCGCCAGCGGTTCGCTGATCACCGCCCGGCTCGCCGC CGAGCAAGGCCGCGAGGTGTATGCGATACCCGGGTCGATCCATCACCCCGGGGCCCGGGGCTGTCATCAGCTGATTCGTGATGGCGCGGTGCTGGTGGAA ACCATCGAACATATCCTCGAAGCCCTGCGTGGCTGGCAACGACTGCCGTTATCCCCAGCCCCGCCACCAGTCGCGCCCGCTCACCCGTTGCTGGCGCTGT TGCATGCTGCGCCGCAGACCAGCGAGGGCCTGGTGCAGGCCAGTGGCTGGAGCCTGTCCAGGGTGCTGGCGGCGCTTACGGAGCTGGAGCTGGAGGGCCA TGCGGTATGTGAAGCAGGCTGCTGGTATGCCCGGGCAAAAGGCTAGGCTTTATAAGCAGGATCGGTAAACTGCGCACAGCCTTAATCCGGAGAGTCAGCA
DNA Sequence for Gene
>PCH03S_RS22240
ATGGTCAGCAGTTGGCGTGTGCAACAAGCCGCACGAGAAATTCGCGCAGGGGCGGTGATTGCCTACCCAACCGAAGCAGTCTGGGGGTTGGGGTGCGACC CGTGGAACGAAGAGGCGGTGGACCGGTTGCTGGCCATCAAGTCGCGCTCCGTGGACAAGGGCCTGATCCTGATCGCCGACAACATCCGCCAGTTCGATTT CCTCTTCGAGGACTTCCCCCAGGAATGGCTCGATCGCATGGCCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCCCATCAGAATCTGTTGCCGGAA TGGGTCACTGGGGTCCACGACACCGTGGCCTTGCGGGTCAGCGATCATCCACTGGTGCGCGAGTTATGTGTGCTGGTGGGGCCGCTGATTTCCACCTCGG CCAATCCCCAGGGGCGCCCGGCCGCCCGCACGCGGATTCGCGTCGAGCAGTATTTCCGCGGGCAGCTGGACATGGTCCTGGGCGGCAGCCTGGGCGGGCG CAAGAACCCGAGCCTGATCCGCGACCTGGTGACCGGCAAGATCGTGCGTCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCGCGTCATCGTTTATCGCGGGCAAGTCGGATCGCCGCCCGCGATGCATTTCAAGGCAGCAGAATGGTCGAACCCGTGGTGCGCCGCGCCGCCAGTTC GATCTGTGCCTTCGCCGCTTCCGCCAGTGGATAACGCTGGCCGATCTCGATCTTCAGCTTGCCGCTGGTAATCATGCCGAACAGATCGTCGGCCATGGCC TGCAGGTTCTCGGCGTTGTTGGCGTAGGTGCCCAGGGTCGGACGGGTGACATACAGCGAGCCCTTGGCCGCCAGGATGCCCAGGTTGACCCCCTCCACCG CGCCCGAGGCGTTGCCGAAGCTGACCATCAGGCCCCGTGGCTGCAGGCAGTCCAGCGAGGTCAGCCAGGTGTCCTTGCCCACGCCGTCGTAGACCACCGG GCATTTCTTGCCGTCGGTCAGCTCCAGTACGCGCTTGGCCACGTCTTCATGGCTGTAGTCGATGGTTTCCCAGGCGCCGAGGGATTTCGCCAGCGCAGCT
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKSRSVDKGLILIADNIRQFDFLFEDFPQEWLDRMASTWPGPNTWLVPHQNLLPE WVTGVHDTVALRVSDHPLVRELCVLVGPLISTSANPQGRPAARTRIRVEQYFRGQLDMVLGGSLGGRKNPSLIRDLVTGKIVRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site