Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS25690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACAGCTGGGTGTACCGCGCCCGCCCCGACGTGAACTGCATCATCCACACGCACCCGACCCACGTCGCCGCGTTGTCGATGATCGAAGTGCCGCTGGAAAT CTCCCACATGGACCTGTGCCCGCTGTATGACGACTGCGCCTTTCTCAAGGCCTGGCCGGGCGTGCCGGTGGGTAACGAAGAAGGCGAGATCATCTCCGCG GCCCTGGGCGACAAGCGCGCCATCCTGCTCTCGCACCACGGCCAGCTGTCCACCGGCGCCAGCATCGAGGAAGCCTGTGTGATCGCCCAGTTGATCGAGC GCGCCGCCAAGCTGCAATTGCTGGCCATGGCCGCCGGCACCATCAAGCCGATCCAGCCGGAGCTCGGTCGCGAGGCCCATGACTGGATCTCCAAGCCCAA GCGTCACGCCGCCGCCTTCAACTACTACGCTCGGCAGAACCTCAAGCAACACGCCGATTGCCTGAACTGAAACCACCCTATTCGCTAAAGGAGCGTCGCC
DNA Sequence for Gene
>PCH03S_RS25690
ATGTCGAACACCCACATTCACGGCATCATCGGCTACACCATCACCCCGTTCACCGCCAACGGTGAGCAACTGGACCTGGACACCCTCGGCCGTTCCATCG ATCGCCTGATCGACAGCGGCGTGCATGCCATCGCGCCCCTGGGCAGCACCGGCGAAGGCGCCTACCTGAGCGACGCCGAGTGGGACCAGGTCGCCGAATT CAGCATCCGCCACATCGCCAAACGCGTGCCGACCATCGTCAGCGTTTCCGACCTGACCACCGCCAAGGCCGTGCGCCGCGCGCGCTTTGCCGAGGCCAAG GGTGCCGATGCGGTGATGGTGCTGCCGGCTTCCTACTGGAAACTCAGCGAAGCCGAAATCCTCGGCCACTACCAGGCCATCGGCGACAGCATCGGCGTGC CGATCATGCTCTACAACAACCCGGCCACCAGCGGCACCGACATGTCGGTGGAGCTGATCCTGCGGATCTTCAATGCCGTGGAAAACGTGACCATGGTCAA GGAGAGCACCGGCGACATCCAGCGCATGCACAAGCTGCAACTGCTGGGCGAAGGCCAGGTGCCGTTCTACAACGGTTGCAACCCGCTGGCCCTGGAAGCC TTCGCCGCCGGCGCCAAGGGTTGGTGCACCGCCGCCGCGAACCTGATCCCGCAGCTCAACCTGGACCTGTACCAGGCGGTGCTGGACAACGACCTGGACC GCGCGCGCGAGCTGTTTTACCGCCAGTTGCCGGTGCTCGACTTCATCCTCAAGGGCGGCCTGCCGACCACCATCAAGGCCGGGTTGAACATGACCGGGCT GCAGGTCGGCGACCCGCGCCGGCCGGTGTTCCCGCTGGGTGAGGCTGGGCGTAATCAATTGCAGGCCATGTTGAACGCCGTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGGCCTTCACTGTAGCGGCGAGCTTGCGGGCCTCATCGCCGGCAAGCCTGGCTCCTACAGAAGCCAAAGACGCCACCGACCTGTAGGAGCGAGCTTGC TCGCGATGATGCCAGCAGGAGCGCCGCACAACTTGCCCGAGATAGCGGTGCATCAGGCAAAACACCTTGCCTTAAAACGCCGCCCAACAAAAAGCCCGAC AGGTTGTCCTGTCGGGCTTTTGTGCTTCAGAGCAGAAAACTAAACGGTCTTGTCCTTGATGGTGGTGGTTGGACCGTTGGTCTTGACGCTTTCGATACCG CCGTCGCGTGCCGCCTCGGACGAATAGCGCTGGCTATTGCCGATGATCTGGTGGTTCGCCGCCTTGAGGTTGAAATAAGGCTTGCCGTCCTTGGAGACTT CCTTGGCGTAGCGGGCCTCGTTGGGGCTGTTGGTCTGCACCGAAGCGATGCCGTTTTCGGCGGCGCTGCGGGAGGAATACAGCTCACTCGTCAAAATGGT
Amino Acid Sequence
>dihydrodipicolinate synthase
MSNTHIHGIIGYTITPFTANGEQLDLDTLGRSIDRLIDSGVHAIAPLGSTGEGAYLSDAEWDQVAEFSIRHIAKRVPTIVSVSDLTTAKAVRRARFAEAK GADAVMVLPASYWKLSEAEILGHYQAIGDSIGVPIMLYNNPATSGTDMSVELILRIFNAVENVTMVKESTGDIQRMHKLQLLGEGQVPFYNGCNPLALEA FAAGAKGWCTAAANLIPQLNLDLYQAVLDNDLDRARELFYRQLPVLDFILKGGLPTTIKAGLNMTGLQVGDPRRPVFPLGEAGRNQLQAMLNAVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site