Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS26625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGGCCGGGCAGAACCACCATTTCAGCCAGTTCGCCCCGGAGAAAATCCCTTACGCGATCAAACGCTACGTCGATGAAACCGCGCGCTTGTACGGGGTG CTGGACCGACGCCTGGCGGACCGCGATTTCGTCGCCGGCAGCGAATACAGCATCGCCGACATGGCGATCTATCCGTGGATCGTCTCCCACAAGTGGCAAA GCCAGAATCTGGAAGACTTCCCCAACCTGCATCGCTGGTTCAACCGCATCCTCGATCGCCCCGCGACCGCGCGCGCCTATGCCATCGCCGCCCGGATCAA CCCACCCAAATCCTGAGGCCCGATAGTCCACTGCCGGCCGGCAAACAGCAGTGGCTGCTCTGTTCCGGGCAACCACCGAACGGCCGGCGCGGGCTATTTA TCCGGCAACGCAGAAATACTCTCAGCCCCCGCTTGCGCGGCACTCGCCTGCTCACTAACGTAGCGCCTTTATCGACGCTACCCCCCGCAGGAGCTTTGCC
DNA Sequence for Gene
>PCH03S_RS26625
ATGGCCTCGCCAGCCTTCTCACATTTTCTTCCCCGGTTCGGCGTTGCCGCGGCAGTGGCCGGCGTTCTCAGCCTGGCCGGTTGCCAGTCATGGAACACCC AGGACAGCCTGCCGCCGACCTCTGGCGTGCAACCGCTCAAGGGCCTGGCCCAGAACGTTTCGGTCCGGCGCAATGCCATGGGCATGCCGCTGATCGAAAG CAGCACCTTCCACGATGCGCTGTTCGCCCTGGGTTACGTGCACGCCAGCGACCGGATCAACCAGATGGTGACCCTGCGCCTGCTGGCCCAGGGCCGGCTG GCCGAGATGTCCGGTGCCGACGTTCTGGACGTCGACCGCTACATGCGCGCGGTCAACCTGAAGAACAGTGCCGGCGAGCTGTACAAAGCCTCGTCCCCGA GGATCAAGCGCTTCTTCGAGGTCTACGCCCGCGGGGTCAACGCCTACCTGTTCCGCTACCGCGACAAGCTGCCGCCAGACCTGGCCGCCACCGGCTACAA GCCCGAATACTGGAAACCGGAAGATTCGGCGCTGATCTTTTGCCTGCTGAACTTCAGCCAGTCGGCCAACCTGCCGGAAGAAATCAACGCCCTGGTGCTG GCGCAGAAAGTTGGCGCCGACAAGCTCGCCTGGCTGACCCCGAGCTACCCGGACGAAGCGCTGCCGCTGGCCGAGAGCGACAAGCTCAAGGGCCTCAACC TGAATGTCCCGGGCTTGAGCGAAATCAGTGCCGCCGCCGGCAAGCTTGGCGAACTCAACCCGCTGAGCATCGCCGGCGCCAGCAACTGGGCCATCGCTCC CCAGCGCAGCCGCAGCGGCAAAAGCCTGCTGGCCGCCGACAGCCACTCGCCGGCATGGAACCTGGTGCAGATCCGCGCGCCCAAGTACCAGGCCGCGGGC GCCTCGATCGCCGGCCTGCCGATGATCATCCAGGGCTTCAACGGCAAGGTGGCCTGGAGCATGACCTCGGTCGCCGGTGACAACCAGGACCTGTTCCTGG AAAAACTCAAGCGCCAGGGCAATGCGCTGTATTACGAAGCCAATGGCAAATGGCTGCCGGCCGTGGTGCGCAACGAAACCTACTTCGTCAAAGGCCAGCG GCCGATTCGCGAGGTGGTCTATGAAACCCGTCACGGCGCCCTGCTCAACAGCGCCAGCAACCTGAGCGGCGGTTACGGCCTGGCCCTGCAACAGCCGGAC CTCAAGGACGACAAGAGCCTGGACGCGTTTTTCGACCTGTCGCGGGCGCAGAACGTGGAGCGAGCCTCCGACGCCAGCCGCGAGATCCGCGCCATCGGCC TGAACATGCTGTTCGCCGATGCCAGCCATATCGGCTGGCAGGTCACCGGCCGCTTCCCCAACCGCCGTGAAGGCGAAGGCCTGCTGCCGTCGCCGGGCTG GGAAGGCCGTTACGACTGGGACGGCTATGCCGACCCGATGCTCCACCCCTATGACCAGGACCCGGCCCAGGGCTGGCTGGGCACCGCCAACCAGCGGATC ATCCCCCACGGCTATGGCATGCAGCTGTCCAACTCCTGGTACTACCCCGAGCGTGGCGAACGCCTGGCCGAGTTGGCCGGCAGCGGCAAGCACGACGGCC GCAGCATGATCGCCATGCAGTACGACCAGACCACCCCCTTCGCCGCCAAGCTGAAGAAGATGTTCGAAGCCCCCGGCATGGCGCAGCCCCTGAAGAAAGC CATCGACGCCCTGCCCGAAGCCGAGCGCAGCAAGGCCCGCGAGGCTTACAGCCGCCTGATGGCGTTCGACGGCAAACTCAGCCCGGTGTCGGCCGATGCG GCGATCTATGAGCTGTTCCTGCAGGAAAGCGCCCGGCAGATCTTCCTCGACAAACTGGGTTCGGAATCCAGCCCGGCCTGGAAGGCCCTGGTGGCCAACG GCGCGCTGTCCTACTCGGCCCAGGCCGACCATCTGCTGGGCCAGGAAGACAGCCCGTTCTGGGATGACAGCCGCACCCCACAGAAAGAAGACAAGCCGGC GATCCTCGCCCGCAGCCTGGCCGCCGCCATCAGCGCCGGTGAAAGCCAGCTGGGTGGCGACCGCAGGGCATGGCAATGGGGCAAGCTGCACAGCTACCAC TGGAAGAACGCCAATGGCCAGGTCGTTCGCGGGCCGCTGCAGGCCGGTGGCGATCACAGCACCCTGAACAGCTCGCCGTACCGCTGGGGCCAGGACTTCA CGGTGACCGAGGCGCCGGCGCTACGGTTGATCGTCGATTTCGGCCAGAGCGAACCGCTGAGCGTCATCAACAGCAGCGGCCAGTCGGGCAACCCGGCCAG CCCGAACTACCTGAACGGCATCGACGCCTGGCTCAAGGGCCAGTACCTGAGCTTGCCGCTGCAACCGCAGAACTTCGACCGCCTCTACGGCAAGACCCGC CTGACCCTGGCGCCAGGCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCGGCCAGCCCGCCCCTCTCCACAAGGGGCGGGCTTGAGCCCGGTAACGCTTCACTCCCCTCGCCGATCCGGCCCTGCCACGCTCCCGGCAGCCGCGC CCTTTCCTGCGCGAAATCGCCCACGCGCCCTATTGATGCAAGGCTTCCCACACGCTCTTTTTTGGGGCGCGGCCGACGCACGGCAGGCTCTCGCACCACC TTTTAAAACAGTTGTTCGGGACTCTGGTTCGGAAATTGCTACTTTCATTAAGTCTGACGCGTTGCAGTAACAGTACTAATGCGCCACAAGCGCTCATATT GGTTTTTAGGGATTTAATAATGAAAAAAGCATTGCTGACCCTTTCTGCACTGGCTCTCTGCATGGCCGCCGGTTCCGCGCTGGCCAAGGAATACAAGGAA CTGCGCTTCGGCGTTGACCCGTCCTACGCACCTTTTGAATCCAAGGCCGCCGATGGCAGCCTGGTCGGCTTCGACATCGATCTGGGCAATGCCATCTGTG
Amino Acid Sequence
>acyl-homoserine lactone acylase subunit beta
MASPAFSHFLPRFGVAAAVAGVLSLAGCQSWNTQDSLPPTSGVQPLKGLAQNVSVRRNAMGMPLIESSTFHDALFALGYVHASDRINQMVTLRLLAQGRL AEMSGADVLDVDRYMRAVNLKNSAGELYKASSPRIKRFFEVYARGVNAYLFRYRDKLPPDLAATGYKPEYWKPEDSALIFCLLNFSQSANLPEEINALVL AQKVGADKLAWLTPSYPDEALPLAESDKLKGLNLNVPGLSEISAAAGKLGELNPLSIAGASNWAIAPQRSRSGKSLLAADSHSPAWNLVQIRAPKYQAAG ASIAGLPMIIQGFNGKVAWSMTSVAGDNQDLFLEKLKRQGNALYYEANGKWLPAVVRNETYFVKGQRPIREVVYETRHGALLNSASNLSGGYGLALQQPD LKDDKSLDAFFDLSRAQNVERASDASREIRAIGLNMLFADASHIGWQVTGRFPNRREGEGLLPSPGWEGRYDWDGYADPMLHPYDQDPAQGWLGTANQRI IPHGYGMQLSNSWYYPERGERLAELAGSGKHDGRSMIAMQYDQTTPFAAKLKKMFEAPGMAQPLKKAIDALPEAERSKAREAYSRLMAFDGKLSPVSADA AIYELFLQESARQIFLDKLGSESSPAWKALVANGALSYSAQADHLLGQEDSPFWDDSRTPQKEDKPAILARSLAAAISAGESQLGGDRRAWQWGKLHSYH WKNANGQVVRGPLQAGGDHSTLNSSPYRWGQDFTVTEAPALRLIVDFGQSEPLSVINSSGQSGNPASPNYLNGIDAWLKGQYLSLPLQPQNFDRLYGKTR LTLAPGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site