Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS27395

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCAAAGCCTTGATTTACGGGGTTCGAGCACTTGGCACGCGGCTTGCTATGTCCAGCTTACGAAAAATCTGGTCGAAGGTTTCCCGACATGAGCATCAG CTTCGATAAAGCGCTCGGCATTCATGAACAGGCTCTTGGCTTTCGCGCCAAGCGTGCCGAGGTGCTGGCCAACAACATCGCCAACGCCGACACCCCGAAC TACAAGGCTCGGGATCTGGACTTCTCCGCCGTGCTCGCCGAGCAGAATGAGAAAGCCAAGAGCGGCACCTTTGCCCTGAACATGACCAACAGCCGGCACA TCGAAGCTGAAGGCCTGAGCAGCGGCGACGAGTCGCTGCTGTATCGCACGCCGATGCAACCATCGATCGACCAGAACACCGTGGATGCCCAACTGGAACA GTCGAACTACGCCGAGAACTCGGTGAACTTCCAGGCCAGCTTCACGCTGCTCAACAGCAAATTCAAAGGGCTGGTGTCAGCCCTGCGCGGAGAGTAATCC
DNA Sequence for Gene
>PCH03S_RS27395
ATGTCCCTCGCCAGTGTTTTCAATATTGCCGGTAGTGGCATGAGTGCCCAGACCACTCGCTTGAACACCGTCGCCAGTAACATCGCCAACGCCGAGACGG TCTCCTCGAGCATCGACCAGACCTACCGTGCGCGCCACCCGGTGTTCGCCACCATGTTCCAGGGCGCGCAAAGCGGCGGCAGCCAGTCGCTGTTCCAGAA CCAGGACGCGGCCGGTCAGGGCGTCCAGGTGCTGGGTGTGGTCGAGGACCAGAGCAATCTCGAGGCGCGTTACGAGCCTAACCATCCGGCCGCCGACGCC AAGGGGTATGTCTACTACCCCAACGTCAACGTGGTGGAAGAAATGGCCGACATGATTTCCGCCAGCCGCTCGTTCCAGACCAACGCGGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTCCTGACCCTCGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGAGGCGACTCAGATGAGTGTTTCCGATAGCACCAGTGGCCTGACGCTCAAGGAGATCCTGGCGAACTCCTCGAAGAAGACCCCGACCACCAGCAATG ATGGCCTGGCGGCGGCCACCAACAGCGTCAAGGGTAAAAACGAGCTGGGCAAGGACGCGTTCCTGAAGCTGCTGGTGACCCAGCTGAAAAACCAGAACCC GCTGGACCCGCAGGACAACAGCGAGTTCGTTGCCCAGTTGGCGCAGTTCTCCACCCTGGAAGGGATCACCACCCTCAATACCTCGGTGAACTCCATCACT GGCAGCTACAAGTCGTCCCAGGCCCTGCAGGCTTCGTCCCTGGTGGGGCGTTCGGTGATCGTCCAGGCCGGTACCACCCAGGTCGACACCACCAAGAGCA TGACCGGTTCGGTGACGGTTCCGGCCAGCGTCAGTGGTCTGAAGGTGACCATCACTGACAAGGATGGCAAGGAGGTCAAGACCCTCGACCTGGGCAGTCA
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLASVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGAQSGGSQSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADA KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site