Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS28110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGGGCCATCGCAGCCAAGCCTCGCTCTTACACGTTCATAGCCACAGATTGGCCGAAATCCTGAAGTGCTTGGCCGGTTGCGCAGGTTTTCGCTCCCTAC ACTCCCGACATGCCCAATCGCCGCCGCCCAGGCCGGCGCACTGCCCGGAGTTCGTCATGCATTACCTCATCTCCCTTGCCATCGGCCTCGGCGTTGGCCT GCTCTACGGCGCCCTGAACTTTCGCTCGCCGGCGCCGCCGGCCATCGCCCTGGTCGGGCTGCTCGGCATGCTCGCCGGCGAACAGCTGTGGCCCATGGGT CGGCAGCTGGTGAGCAACTGGTTGTCCTGAGGCTTTTCGATCCTTTTATTTATTCCTGTTCATGGAGGCGCTT
DNA Sequence for Gene
>PCH03S_RS28110
ATGCACGCCCTGCAATTTTCCAAGACCGGCGATCTGTCGTCGCTGCACTACGTCGAGGTGCCGACCCCGGTGCCGGCCGCCGATCAGGTACTGGTGCAGA TCAAGGCCGCCGGCCTCAACCCCAGCGATGTGAAGAACGTGCTCGGGCGTTTTCCCTACACCACCGTGCCGCGCATTCCCGGGCGGGATTTCGCCGGGGT GGTGGTGGACGGGCCCCGGGAGCTGGTGGGGCAGGAGGTCTGGGGCACCGGCAAAGAGCTGGGGTTCTACGCGGACGGCTCCCATGCCCAGTACGTGGCG CTGTCGGCCAAGGGCGTGGCGCACAAGCCGGCGCACCTGAGTTTTGCCCAGGCCGCCAGCCTGGGCGTGCCTTACACCACCGCCTGGGATGCCCTGGAGC GCAGCGGAGTGGGCGCCGGTACCACCTTGCTGGTGATTGGCGGCGGGGCGGTGGGCAGCGCCGCCCTGGCCCTGGCGAAGATTCGCGGAGCCCGGCTGCT GGCCGCCGCACGGCGCCCGGAGCAGGTCAAGGCGTTGCAGGCGCAAGGGTTCGAGACCGTGCAGCTGGACCAGCCGGAAAACCTCGGGGCCCAGGTCAAC GCCGTGTTCGCCGACGGCGCCGAGGTGATCTTCGACACCACCGGCTTCTGGCTGCCGGCCTCGGTCGCGGCCCTGGCGCCGTTCGGCCGCATCGCCATCA TCGCCGCGCCGGTGGACGGCCATGTGCAGTTGCCGGCCCTGGGCCTGTACCGCAAGGGCGGCTCGGTGGTCGGGATCAACTCGCTGCTGTACGGCGTGCA GGCCTGCGCGGCCATGCTCGAGCAGTTCGGCCGGTTCTTCGATGAGGGGCTGTTGCCATTGCCGCAGGGGCTGTTCGAATCGCCGCTGGAGCAGGGCGTC GAGCGCTACCACGAGGTCAATCGGGGCAGTGGCGAGAAGGTGATTTTGCTGCCGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGTGGCCAGCCCACATGAATCGGCAGGCTGGCCCGGCTTTGTGTAGCCGCTGCCGAAGGCTGCGATCGCCCCGAAGGGGCGCGGCGATCTTGCGTTCGC CGAGGTCCTTCGGCGCTTATATTGAGCTCCTTCGGACCTATCGCAGCCTGCGGCAGCGGCTACAGGTTGGGGGCTGTGTCGTGCCTGGGGCCTTGCTCGC GATGACGTCAGCCCAGACAACCTGGCAACGAAGGTTGCAGCGCTTTTTCGATCACGCCTCCGGCACGCCTTTCTCCCACGCCGACCAGTTCTTCAGGATG TCCTGCACCAGCGGATTGCCGGTGCGATAGAGGTTTTCCAGGGCCGGGACGAAACCGCCCTGGTCGGCGTACTTGAGCAGGTTGTCGACTTCGCTGCCGC CCGGCTCGGGGCGGTCGAAGTCGGAGCCGGCGCGGACCACCGCCAGCCGCTGCACGTCCACCCGGCCTTCGCGGCTGGCGCGCAGCAGGGCTTCGTAGGT
Amino Acid Sequence
>oxidoreductase
MHALQFSKTGDLSSLHYVEVPTPVPAADQVLVQIKAAGLNPSDVKNVLGRFPYTTVPRIPGRDFAGVVVDGPRELVGQEVWGTGKELGFYADGSHAQYVA LSAKGVAHKPAHLSFAQAASLGVPYTTAWDALERSGVGAGTTLLVIGGGAVGSAALALAKIRGARLLAAARRPEQVKALQAQGFETVQLDQPENLGAQVN AVFADGAEVIFDTTGFWLPASVAALAPFGRIAIIAAPVDGHVQLPALGLYRKGGSVVGINSLLYGVQACAAMLEQFGRFFDEGLLPLPQGLFESPLEQGV ERYHEVNRGSGEKVILLP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site