Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS29425

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	57	-
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	414	439	-
NCBIfam	NF038228	NCBIFAM: type IVB secretion system protein IcmH/DotU	-	-	70	286	5.5E-47
NCBIfam	TIGR03349	JCVI: DotU/TssL family secretion system protein	IPR017732	Type IV / VI secretion system, DotU	72	281	4.8E-71
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	301	455	8.6E-43
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	335	449	2.22E-29
PANTHER	PTHR38033	MEMBRANE PROTEIN-RELATED	-	-	67	291	1.4E-51
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	345	449	2.93905E-34
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	345	443	3.9E-16
Gene3D	G3DSA:1.25.40.590	Type IV / VI secretion system, DotU	IPR038522	Type IV / VI secretion system, DotU superfamily	70	227	6.2E-49
Pfam	PF09850	Type VI secretion system protein DotU	IPR017732	Type IV / VI secretion system, DotU	73	275	5.2E-68
NCBIfam	TIGR03350	JCVI: type VI secretion system protein TssL C-terminal extension domain	IPR017733	Type VI secretion system, OmpA-like domain, proteobacteria	313	449	2.6E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.