Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, PCH03S_RS29410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00498
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF49879 | SMAD/FHA domain | IPR008984 | SMAD/FHA domain superfamily | 13 | 105 | 7.65E-22 |
| Pfam | PF20232 | C-terminal domain of Type VI secretion system FHA protein | IPR046883 | Type VI secretion system, FHA domain-containing protein, C-terminal domain | 279 | 458 | 1.8E-63 |
| Pfam | PF00498 | FHA domain | IPR000253 | Forkhead-associated (FHA) domain | 29 | 97 | 1.4E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 222 | 236 | - |
| Gene3D | G3DSA:2.60.200.20 | - | - | - | 3 | 107 | 1.3E-20 |
| NCBIfam | TIGR03354 | JCVI: type VI secretion system-associated FHA domain protein TagH | IPR017735 | Type VI secretion system, FHA domain-containing protein | 3 | 459 | 1.6E-130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 160 | 239 | - |
| CDD | cd00060 | FHA | - | - | 4 | 104 | 3.50427E-20 |
| SMART | SM00240 | FHA_2 | IPR000253 | Forkhead-associated (FHA) domain | 27 | 78 | 2.2E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.