Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS29045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1252 | 1293 | 0.0088 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1611 | 1649 | 0.012 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 708 | 747 | 0.003 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 328 | 366 | 3.6 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1296 | 1341 | 130.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 501 | 541 | 1.6E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 543 | 581 | 9.1E-7 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1369 | 1413 | 4.9 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 481 | 520 | 3.2E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1146 | 1185 | 5.8E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 400 | 437 | 2.3E-4 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 599 | 633 | 0.12 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 528 | 594 | 2.4E-5 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 60 | 307 | 9.2E-62 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 958 | 995 | 2.5E-7 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 82 | 180 | 6.7E-19 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1216 | 1257 | 7.7E-4 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 312 | 397 | 0.37 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 978 | 1016 | 3.9E-6 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 51 | 344 | 1.9E-102 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 402 | 469 | 7.0E-4 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2392 | 2535 | 8.8E-9 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1042 | 1082 | 0.19 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1864 | 1891 | 28.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1085 | 1123 | 0.001 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 929 | 957 | 0.96 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 638 | 686 | 1.8E-4 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1657 | 1701 | 2.5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1210 | 1250 | 1.0E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 666 | 706 | 0.006 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1573 | 1609 | 0.42 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 725 | 795 | 0.56 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1562 | 1606 | 0.062 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 522 | 562 | 3.7E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1753 | 1790 | 0.49 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 440 | 480 | 0.12 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1748 | 1796 | 0.016 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 750 | 780 | 0.33 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 855 | 891 | 4.4E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 563 | 602 | 3.9E-4 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1905 | 1924 | - |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 64 | 185 | 9.6E-50 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 584 | 624 | 0.045 |
| Coils | Coil | Coil | - | - | 837 | 857 | - |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 625 | 664 | 3.0E-7 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 812 | 850 | 6.7E-8 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1322 | 1362 | 3.3 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1611 | 1650 | 1.7 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1411 | 1450 | 0.78 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2145 | 2221 | 0.03 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1459 | 1491 | 5.1 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 954 | 1024 | 0.0055 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1025 | 1061 | 0.59 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1107 | 1144 | 0.13 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1065 | 1104 | 0.15 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 779 | 795 | 4.6 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 847 | 891 | 0.024 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 2279 | 2314 | 0.62 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1076 | 1156 | 0.021 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1297 | 1321 | 1.3 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1231 | 1272 | 1.8E-7 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 56 | 406 | 4.39E-57 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1188 | 1229 | 0.33 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1369 | 1404 | 0.0033 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.