Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS28485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis subsp. aurantiaca strain JD37, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAACTGATGGCGCGGGTCAAGGCCGTGCTGCGTCGCCAGTCGGCTCCGGTGCCGGGCGCGCCGGGCAGCGAAGACGAAAACGTCACTTTCGGCGACTACG AGTTGTCCCTGGCCACCCGCGAACTCAAGCGCGGCGCCGAAGTGCACATGCTCACCACCGGCGAGTTCGCGGTGCTCAAGGCCCTGGTGATGAACGCTCG CCAGCCGCTGACCCGCGACAAGCTGATGAACCTGGCCCGTGGCCGCGAGTGGGATGCCCTGGAGCGTTCCATCGACGTGCAGATCTCCCGCCTGCGCCGG ATGATCGAGCCCGATCCGTCCAAGCCGCGTTATATCCAGACGGTCTGGGGCGTGGGTTATGTGTTCGTGCCGGATGGCACCACCACCAAGTGACCGATGA TTTGTAGGAGCGAGCGCCCGGGCCGGCAAACGACCCGGGCGCTCGCATTCCGCAACTCTGCGAGCGCGACTCGCTCCTGCAAAGCGTGTAATGGCTGTTT
|
|
| DNA Sequence for Gene |
>JM49_RS28485
ATGAAAACCCCGCTGTGGTTCCCGCAAAGCTTCTTCTCCCGCACCCTCTGGCTGGTGCTGATCGTGGTGCTGTTCTCCAAGGCGCTGACCCTGGTTTATC TGCTGATGAACGAGGACGTGCTGGTAGACCGCCAGTACAGCCACGGCGTGGCCCTGACCCTGCGCGCCTATTGGGCCGCCGATGAATCCAACCGCGACCA GATCGCCGAGGCCGCCGGCCTGATCAAGGTGGTTGGCAGCGGTGTGCCGGCGGGCGAGCAGCATTGGCCCTATAGCGAGATTTATCAGCGGCAGATGCAG GCCGAATTGGGCGCCGACACTGAAGTGCGCCTGCGCATGCACGCCCCGCCAGCGCTCTGGGTGCGCGCGCCGAGCCTGGGCGATGGCTGGCTGAAAGTGC CGCTGTATCCGCATCCGTTGCGGGGGCAGAAGATCTGGAGTGTGCTCGGCTGGTTCCTGGCGATCGGCCTGTTGTCCACGGCTTCGGCATGGATCTTTGT CAGCCAGCTCAACCAGCCCCTCAAGCGCCTGGTCTACGCCGCCCGGCAACTGGGCCAGGGGCGTAGCGTGCGCCTGCCGATCAGCGATACGCCGAGCGAG ATGACCGAGGTGTACCGCGCCTTCAACCAGATGGCCGAGGATGTGGAACAGGCCGGGCGCGAACGCGAGCTGATGCTGGCGGGGGTGTCCCACGACCTGC GCACGCCGTTGACCCGTCTGCGCCTGTCGCTGGAGTTGATGGGCAGCCACAACGACCTGACCGACGACATGGTCCGCGACATCGAAGACATGGACGCGAT TCTCGACCAGTTCCTGGCCTTTATCCGCGACGGCCGCGATGAGTCGGTGGAAGAGGTCGATCTCAGCGACCTGGTGCGTGAAGTGGCGGCGCCCTACAAC CAGAACGACGAAAAGGTGCGCCTGCGCCTGGAGCCGATCCCGCCATTCCCGTTGCGCCGGGTATCGATGAAACGCCTGCTGAACAACCTGATCGGCAACG CGTTGAACCATGCGGGGACGGAAGTCGAAGTGGCGGCCTATGTGTCGGGCGACACCAGCGCGCCTTATGTGGTGCTGAGTGTGATGGACCGAGGCGCGGG CATCGATCCGTCGGAGCTGGAGGCGATCTTCAACCCCTTCACCCGTGGCGACCGCGCCCGGGGCGGCAAGGGCACCGGCCTGGGCCTGGCCATCGTCAAG CGGATCGCCTCGATGCACGGCGGCAACGTCGAATTGCGCAACCGCGCCGATGGCGGCCTGGAAGCGCGGGTGCGGTTGCCGTTGGGGTTGTTGTTGCCCA GGGATGCGGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGCAGCGGCAAGCTACAAGCTACAAGCTACAAGCTACAAGTGAGGAGTCGTTTTTCTCTTGTAGCTTGCCGCTAAAAGCTTGCCGCTGCCCTTAACCCT TGCCCTTGGTCCGGGTCATGTTCGGGCCACCGTTTTTCTCGATGTGCTCGATGATGATCCCCGCCACGTTCTTGCCGGTGGTGGTTTCGATACCTTCCAG GCCCGGCGAGGAATTCACTTCCATCACCAGCGGCCCGTGGTTCGAACGCAGGATATCCACGCCCGCCACGCTCAGGCCCATGACCTTGGCCGCGCGCAGG GCGGTCATGCGTTCTTCCGGGGTGATCTTGATCAGGCTGGCGCTGCCGCCACGGTGCAGGTTGGAGCGGAACTCGCCGGGCTTGGCCTGGCGCTTCATCG CGGCAATCACCTTGTCGCCGACCACGAAGCAGCGGATGTCGGCGCCGCCGGCTTCCTTGATGTACTCCTGGACCATGATGTTCTGCTTCAGGCCCATGAA
|
|
| Amino Acid Sequence |
>ATPase
MKTPLWFPQSFFSRTLWLVLIVVLFSKALTLVYLLMNEDVLVDRQYSHGVALTLRAYWAADESNRDQIAEAAGLIKVVGSGVPAGEQHWPYSEIYQRQMQ AELGADTEVRLRMHAPPALWVRAPSLGDGWLKVPLYPHPLRGQKIWSVLGWFLAIGLLSTASAWIFVSQLNQPLKRLVYAARQLGQGRSVRLPISDTPSE MTEVYRAFNQMAEDVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMGSHNDLTDDMVRDIEDMDAILDQFLAFIRDGRDESVEEVDLSDLVREVAAPYN QNDEKVRLRLEPIPPFPLRRVSMKRLLNNLIGNALNHAGTEVEVAAYVSGDTSAPYVVLSVMDRGAGIDPSELEAIFNPFTRGDRARGGKGTGLGLAIVK RIASMHGGNVELRNRADGGLEARVRLPLGLLLPRDAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|