Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS15280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis subsp. aurantiaca strain JD37, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGACACGCTCGTCGGCTGCATTCCAGATGTATGACTCAAAAGGACAAAAAACAGCACGATCTGTATCTTCCAGAAGCTTGCGAAAGGTTCTAAAAAGT CGCCCTCACAACCGCCTGGCACGCTCTGCGGGCGGAAAAACTGAACCCTGGCTGTCTGCTTCGAAGATAAACGGTGTCTTGCCCTATTTTTCATATTCGT TTCACATTTTTCCGCTTAATCTCGGGCCCTCGAAACCTGGATCCAGCGCGAGGAAAATTCTGAACGCGACCTTGGGATCGATCTTATTTCACCTATAACA CCTTGATCCGTATTTACTTTCGCTCAATATGGTCTTTACTCAAGCACGGCAAGGACTGCCTTCACAGCTCAACCATGGATAAGCACCAATGACTGCATGC ACTTCGTTACCCGGCATCAATAAAAACAAGAATCGTCCGCACGTCTCACACATCGCTTGAACCCTTCGTTCTCTGACGTATTTCTTCACCCGAGGTCTCA
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| DNA Sequence for Gene |
>JM49_RS15280
ATGAACCAGGCTTTCCTTCCTTTCTCGCGCCCGAGTATTGGCGATGAAGAGATTGCAGCGGTCGAGCAGGTTCTACGTTCTGGCTGGATCACCACCGGAC CGAAAAACCAGGAGCTTGAGCAGCAATTCGCCGCGCGGGTCGGCTGCAAGCACGCGGTGGCGCTGTCGTCGGCCACCGGCGGCATGCACATCACCCTGCT GGCGCTGGGCATCGGCCCCGGCGACGAGGTGATCACCCCCTCGCAGACCTGGGTTTCCACGGCCAACATGATCTGCCTGCTGGGGGCGACTCCAGTCTTC GTCGACGTCGACCCGCACACCCTGATGACCGATGCTGCCACCATCGAAGCGGCGATCACGCCACGGACCAAGGCGATCATCCCGGTGCATTACGCCGGTG CCGCCTTCGACCTCGACCCGCTGTACGCCCTGGCCGACAAACACGGGATCGCGGTGATCGAGGACGCCGCCCACGCCGCCGGCACCACCTATCGCGGCCT GCCCATTGGCGCCCGGGGCACGGCGATCTTTTCCTTCCATGCGATCAAGAACATGACCTGCGCCGAAGGCGCGATGTTCGTCAGCGATGACGAGGCCCTG GCCAACCGGGTGCGCATGCTCAAGTTCCATGGCCTGGGTGTCGACGCCTATGACCGCCTGACCCACGGGCGCAAGCCCCAGGCCGAGGTGATCGAACCTG GCTTCAAATACAACCTGGCGGATATCAATGCCGCCATCGCCCTGGTGCAGTTGCAGCGCCTGGACGCGATCAATCACCAGCGCGAGGTGCTGGCCAACGC CTACCTGGAGCAACTGCGCGACCTGCCGGTGCAACCGCTGCACCTGCCGCAGTATCCGCAGCAACATGCCTGGCACCTGTTCATCCTGCGTATCGACGCC GAGCGTTGCGGCATCGATCGCGACGGCTTCATGAAGGCCCTGCAGGAGCAGAACATCGGCAGCGGCATCCACTTCGTCGCCACTCACCTGCACAGCTATT ACCGCCAGCGCTTCCCGGATGTGCGGCTGCCCAACACCGAGTGGAACTCGGCGCGCCTGTGTTCGATTCCGCTGTTCCCCGACATGACCCTCGACGATGT CGAGCGGGTCGTCGGCGCCATCAAAACCTGTCTGGACCGAAACCTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCTTATCCAATCCAGTTCGTGTCGATCGTCATTCCGGTCTACAACGAAGAACAGAGCCTGCCCGAACTGCTGCGCCGCACCGAAGCAGCGTGCCGCCA GCTCAAGCACGATTTCGAGATCGTCCTGGTCGACGATGGCAGCCGCGACGACTCGGCGCAGATCCTCGAGGAAGCCGCCGGCCGCGAAGGCAGTCCGGTG GTGGCGGTGATCCTCAATCGCAACTACGGCCAGCACGCGGCGATCATGGCCGGTTTCGAGCAGTGCCGCGGCGATGTGGTCATCACCCTGGACGCCGACC TGCAGAACCCGCCGGAAGAAATCCCGCGCCTGGTGGCCCAGGCCGAGCTGGGCTACGACGTGGTCGGCACGGTGCGCAACAACCGCCAGGATTCCGCCTG GCGCCGCTGGCCGTCGAAGCTGATCAACCTGGCCGTGCAACGCTCCACCGGCGTGGCCATGAACGACTACGGTTGCATGCTGCGTGCCTACCGCCGCAGC
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| Amino Acid Sequence |
>UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
MNQAFLPFSRPSIGDEEIAAVEQVLRSGWITTGPKNQELEQQFAARVGCKHAVALSSATGGMHITLLALGIGPGDEVITPSQTWVSTANMICLLGATPVF VDVDPHTLMTDAATIEAAITPRTKAIIPVHYAGAAFDLDPLYALADKHGIAVIEDAAHAAGTTYRGLPIGARGTAIFSFHAIKNMTCAEGAMFVSDDEAL ANRVRMLKFHGLGVDAYDRLTHGRKPQAEVIEPGFKYNLADINAAIALVQLQRLDAINHQREVLANAYLEQLRDLPVQPLHLPQYPQQHAWHLFILRIDA ERCGIDRDGFMKALQEQNIGSGIHFVATHLHSYYRQRFPDVRLPNTEWNSARLCSIPLFPDMTLDDVERVVGAIKTCLDRNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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