Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS10495 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis subsp. aurantiaca strain JD37, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCGGCAGCAACCAGCCGACGGCAAAGGTACCGACCGCGCCGACGCTGAGCATTTCGCGGTAGTGCCCGCCTTCGAAGCGGCCGAGGGTTTCGGCGATG CGGTCGAAACACTCGCACAGCACCGGCAGCAGGGTTTCGCCCTCGCTGGTCAGCATCAACCCGCGGGGCAGGCGCTTGAACAGGGTGACGTTGAGCTGGG CCTCGAGGCTTTTCACCTGATGACTGACCGCCGCCTGGGTCACACACAGCTCGATGGCCGCGCGGGTAAAACTCAAATGCCGCGCCGAGGCCTCGAAGGC CCGCAGGGCATTCAGCGGCAGATGGGGTCGGATCATGACCACTCCCTAGTTTTTCTAATGGCTCCTGCGAAATATCGTCGTTTGCCGATCCTTCGCCGGC CGCCTACATTGAGCCGGCTCGCAGCGCCTTGCCCCCTGACTGCAAGGGTAGGCGCTGGCAAAAGCCGCTCGGAGTGTAGCGGCCATCACCCTGCAAAATC
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| DNA Sequence for Gene |
>JM49_RS10495
|ampC
ATGGAATGTCAGCCCATCATGCACAACAAAAACCTTGCCCTATCCGGATTTTTCGCCGTTTCCCTGCTGCTCTCCGGCGCCAGCGCCTGCCTGGCCGCCA GCCAGCCGGACAGCGCGCTCAAGCCCCTGGTCGACGCGGCGATCCGCCCGTTGATGCAACAACAGGACATCGCCGGCATGGCGGTGGCCATCACCTTCAA GGGCCAGCCCCATTACTTTAACTACGGCCTGGCCTCCAAAGAGGAGCACAAAGCCGTCGACGCCGACACGCTGTTCGAGGTCGGCTCGGTGAGCAAGCTC TTCACCGCAACCCTGGGGGCCTATGCCCAGGCCAGCGGCAAACTGTCCCTGAACGACCCGGCCAGCCGCTACCTGCCGGCATTGAACGGCAGCCCTTTCG AGCACATCAGCCTGTTGCAACTGGGGACCTACAGCGCCGGCGGCCTGCCATTGCAGTTCCCGGCGCAATGGGACAGCCAGGACAAGATGCTCGGCTACTA CCAGGGCTGGAAACCGGCCTTTGCCCCCGGCGCCCAGCGCCTGTACTCGAACCCGAGCATCGGCCTGTTCGGCTACCTGGCCGCGCAAAGCCTGGGGCAG CCCTTCGAGCAAGTGATGGAGCAGAAGCTGTTCCCGCAACTGGGCCTGTCGCACAGCTATATCCAGGTGCCGAAGTCGCAGATGAGCCATTACTCCCAGG GCTACGGCAAGGATGGCAAGCCGGTGCGGCTCGGCCCCGGCGCCCTGGATGCCGAGGCCTACGGGGTGAAGACCACTGCCGCCGACCTGCTGCGCTTCGT CCAGGCCAACCTCAAGCCCGAGTCGCTGCCGCAACCCTGGCCACAGGCAATCGCCATCACCCATACCGGCTATTACCAGGTCGAGGGCATGACCCAGGGC CTGGGCTGGGAGCTCTACCCCTACCCGCTCAGCCTCGACGCCCTGCTGGCCGGCAACTCGTCGCAGATGGCCTTCGAACCGCACCCGACCCGCTGGTTCA CCCCGCCCCAGGCGCCGCGGGCCAATACCCTGCTGAACAAGACCGGCTCCACCAACGGCTTCGGCGCCTATGTGCTGTTCGTGCCCGGCAAGGACATCGG CCTGGTGCTGCTGGCGAACAAGAACTACCCCAACGCCGAACGGGTCAAGGTCGCCCATGCCCTGCTCAAGGCCCTGGATGACCAGGCCGGCGCGGCGAAG CAACCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAAAAGCGGCCGGGTCGGTTAACTGGCCCGGTCGCTGGGCCAACCGGGAGTGCGTCACCGCCATCACAACGCACTCCGCGACGATGATCGGCGCTGGA TAAAAGCCGCGGAACACGCCATCCTCCGCGTCTTTTTTCCGCGCAGCCCCTGGGGCGCACGTTTTTCCAAGGAAGCCGTCCATGCACAACCAGCCGCTCA GCCCCGCCGAGTTCGAATTCATCGAAGACACCCTGCTCAAGTACGGTGACGACCATTCCGTGCTCAACCTGGCCGAGCTGGACGGTTTCTGTACCGCCCT GGTCTCCGGCCCGACCCAGGTGGACATCGCCGAATGGTTCCCGGCCATCTGGGGCGGGCAGAACCCGGACTGGCAGGACCCCGAGGAGTGCAAGCGCTTC ATCGAGCTGAGCGTGCGCCACCTGAATGCCCTCGCCACCGCACTGGCGAGCGACTCGGCGAGCTTTCAGCCGCGCTTCGAACAGACCGAGCATCAGGACC
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| Amino Acid Sequence |
>class C beta-lactamase
MECQPIMHNKNLALSGFFAVSLLLSGASACLAASQPDSALKPLVDAAIRPLMQQQDIAGMAVAITFKGQPHYFNYGLASKEEHKAVDADTLFEVGSVSKL FTATLGAYAQASGKLSLNDPASRYLPALNGSPFEHISLLQLGTYSAGGLPLQFPAQWDSQDKMLGYYQGWKPAFAPGAQRLYSNPSIGLFGYLAAQSLGQ PFEQVMEQKLFPQLGLSHSYIQVPKSQMSHYSQGYGKDGKPVRLGPGALDAEAYGVKTTAADLLRFVQANLKPESLPQPWPQAIAITHTGYYQVEGMTQG LGWELYPYPLSLDALLAGNSSQMAFEPHPTRWFTPPQAPRANTLLNKTGSTNGFGAYVLFVPGKDIGLVLLANKNYPNAERVKVAHALLKALDDQAGAAK QP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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