Pseudomonas chlororaphis subsp. aurantiaca JD37, JM49_RS02470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 627 | 666 | 3.0E-7 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 2536 | 2554 | - |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 2280 | 2316 | 0.0099 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 503 | 543 | 1.6E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 960 | 997 | 2.5E-7 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1461 | 1493 | 5.1 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 727 | 797 | 0.39 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 483 | 522 | 3.2E-5 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 314 | 399 | 0.45 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1254 | 1295 | 0.0087 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 524 | 564 | 3.7E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 668 | 708 | 0.006 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1044 | 1084 | 0.19 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1190 | 1231 | 0.33 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 2213 | 2251 | 1.4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1613 | 1651 | 0.012 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 545 | 583 | 9.1E-7 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 84 | 182 | 6.7E-19 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1298 | 1343 | 46.0 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 62 | 309 | 9.2E-62 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1299 | 1323 | 1.3 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 954 | 1027 | 1.4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 330 | 368 | 3.6 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 58 | 408 | 4.08E-57 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1371 | 1406 | 0.0033 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2170 | 2321 | 0.0061 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 530 | 596 | 2.4E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 931 | 959 | 0.96 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 565 | 604 | 3.9E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1324 | 1364 | 3.3 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 710 | 749 | 0.003 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 640 | 688 | 2.0E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 402 | 439 | 2.3E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1067 | 1106 | 0.15 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 53 | 346 | 1.9E-102 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1087 | 1125 | 0.001 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 2534 | 2554 | - |
| Coils | Coil | Coil | - | - | 839 | 859 | - |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1413 | 1452 | 1.2 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1755 | 1792 | 0.49 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1212 | 1252 | 1.0E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1233 | 1274 | 1.8E-7 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1371 | 1415 | 0.65 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1416 | 1485 | 2.8 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 814 | 852 | 6.6E-8 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1659 | 1703 | 2.5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 752 | 782 | 0.82 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1750 | 1798 | 0.016 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 849 | 907 | 0.0011 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 980 | 1018 | 3.9E-6 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1218 | 1259 | 7.1E-4 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 442 | 482 | 0.12 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1575 | 1611 | 0.42 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1907 | 1926 | - |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1027 | 1063 | 0.59 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2395 | 2536 | 1.0E-9 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2335 | 2381 | 7.1 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1109 | 1146 | 0.13 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1579 | 1643 | 0.36 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 781 | 797 | 5.6 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 857 | 893 | 4.4E-4 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1866 | 1893 | 28.0 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 586 | 626 | 0.045 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 404 | 471 | 6.4E-4 |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 66 | 187 | 9.6E-50 |
| Pfam | PF05594 | Haemagglutinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1078 | 1158 | 0.023 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1148 | 1187 | 5.8E-5 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.