Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGCAACCTGTGCGAGCGCTACAAGACCCAGTTGATCATCAACGACGACGCAGAACTGGCCGCACGCCTGGGCGTCGGTGTGCACCTGGGCCAGACCG ATGGCCCGTTGGCGCCAGTGCGGGCACTGCTCGGGCACAAGGCGATCGTCGGTGCCACCTGCCACGCCAGCCTGGCACTGGCCGAACAGGCCGCCAGCGA AGGCGCCAGTTATGTCGCGTTCGGGCGTTTCTTCAACTCAAACACCAAGCCCGGCGCCCCCAGCGCAAACCTTGAACTGCTCGAACAGGCGCACCTCAAA CTGCATGTTCCGGTGTGCGCCATTGGCGGCATCACCCTGGACAACGCCGCCCCGCTAGTGGCCCACGGGGTCGACCTGCTGGCGGTGGTCCACGGCCTGT TCGGCGCCGACAGCACCACTGAAGTGACGCGCCGCGCCCGCGCCTTCAACGAGCTGCTGCAGATCAAATAGTCCATTTTTCCGTTTTCGAGAGCCCAACC
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DNA Sequence for Gene |
>AW28_RS30030
ATGTCCCGTTCCGAAACCCTGTTTGCCGATGCCCAGAAACACATCCCCGGCGGCGTGAACTCGCCCGTTCGTGCGTTCAAGAGCGTCGGCGGCACCCCGC TGTTCTTCAAGCACGCCGAAGGCGCGTACGTCACCGACGAAGACGACAAACGCTATGTGGATTACGTCGGTTCCTGGGGCCCGATGATCCTCGGCCACAG CCATCCGGACGTGCTGGATGCGGTGCGCAAGCAACTGGTACACGGCCTGTCCTACGGCGCTCCGACCGCGATGGAAACCGAGATGGCCGACCTGGTCTGC TCGATCGTGCCGTCGATGGAAATGGTGCGCATGGTCAGCTCCGGCACCGAAGCGACCATGAGCGCGATCCGCCTGGCGCGGGGCTTCACCGGTCGCGACA GCATCATCAAGTTCGAAGGCTGCTACCACGGCCACTCCGACAGCCTGCTGGTCAAGGCCGGCTCCGGCGCACTGACCCAGGGCGTGCCGAGCTCGGCCGG GGTACCGGCAGCGTTCGCCAAACACACCCTGACCCTGCCGTTCAACGACCTTGAAGAAGTCGAGAAGATGCTCGGCGAAGTCGGCCAGGAAGTGGCGTGC ATCATTGTCGAGCCAGTGGCCGGCAACATGAACTGCGTACCGCCGGCACCGGGTTTCCTCGAAGGCCTGCGCAGCCTCTGCGACCAGCATGGCGTGGTGT TGATTTTCGATGAAGTGATGACCGGTTTCCGTGTAGCCCTCGGCGGCGCCCAAGCCCATTACGGCGTCACGCCGGACCTGAGCACCTTCGGCAAGATCAT CGGTGGCGGCATGCCGGTGGGCTGCTTCGGCGGCAAGCGCAAGATCATGGAATGCATCGCGCCGCTGGGCCCGGTCTACCAGGCAGGCACCTTGTCGGGC AACCCGCTGGCCATGGCCGCCGGCCTGACCACACTGCGCCTGATCAGCCGCCCGGGCTTCCACGCCGAACTGACCGACTACACCACCCGCCTGCTCGACG GCTTGCAGGTTCGTGCCGACGCGGCAGGCATTCCGTTCGTGACCACCCAGGCCGGCGGCATGTTCGGCCTGTATTTCAGTGGCGCCGATGACATCGTCAC CTTCGAAGACGTGATGGCCAGCGACGCCGACCGCTTCAAGCGCTTCTTCCACCTGATGCTCGACGGCGGTGTGTATCTGGCGCCGAGCGCATTCGAAGCC GGCTTCACTTCCATCGCCCATGGCGAGACCGAGCTGAAGATCACCCTCGATGCGGCCGAACGGGCCTTTGCTGCGCTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGTGGATAACTGACGCTGGCTGAAGCTGGCGTCAGTGATTGCCGACAACCTCCCGCCTTTTTCCTACGTATTTATGCCCGAAGCAGCTATTAGCATT CCCTCGCAGCAGAAAAACGAGTAAAGACTTTGTAAGGATGGCCCTGCTTATTTCATAATGCGCGCTTATTGGATCCCCCGGAGGGTCCGCGCGCCCCTCA GAGGTAAGTCGATTCCCATGAACCGCACCGGCCGCACCCTTGCCTTGGGCTGCCTGTTGCTCCTTCAGCCCCTGCTCGCGAATGCACAGGCAGGCGGTAA CTCGTTGTTGATCCCGGCGCTGGGCCGTTGCACGCTCAATACCCAGCCACAAGATCTCGCACCGGCACTCGACGCCTGTCAAAAAGCGGCGGACGCAGGT GATGCACAAGCGCAATACGAGTTGGGCGAGTTCTACTACGAAGGCAAGGCTGCGCCGCGCGACCTCAAAAAAGCCCTCGACTACTTCGAAAAAGCCTCGC
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Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFADAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRKQLVHGLSYGAPTAMETEMADLVC SIVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTQGVPSSAGVPAAFAKHTLTLPFNDLEEVEKMLGEVGQEVAC IIVEPVAGNMNCVPPAPGFLEGLRSLCDQHGVVLIFDEVMTGFRVALGGAQAHYGVTPDLSTFGKIIGGGMPVGCFGGKRKIMECIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQVRADAAGIPFVTTQAGGMFGLYFSGADDIVTFEDVMASDADRFKRFFHLMLDGGVYLAPSAFEA GFTSIAHGETELKITLDAAERAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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