Pseudomonas brassicacearum PA1G7, AW28_RS23270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACAGGTAACAGCCGACGAACAAGAACACGGTATGCAATGCGGTTTTGATCGGGCGTGCGATATTTTCGGCCTCGGGTGCCCACGACAGGCTGATCAGCG CCCAGCCCGCGAATATCAAGAGGGCGACGAAAACCGGCTCGCGGATCAGTTCCTTCAACGCGCTCGGCCTCAGGCACACGGCTATGAGGGCGGGGATGCT GAACAAACCGTAGAACAATTTATGGTGCTGGCTGCGCCCCGGCAGAAAGAACAAGGCGCACAGCAGCAGCAAGAAGCCAAGCGGAAGAATCCATTGGCAG ATGAAGTCGAAAACTCTATTGGACGTGGCGAGGTGCTTGGATAACATGCTTAGGAATTCATTCCTGAAATCGGTTGGCCATTCAAGGTGATGGCTTTTTG GTGTTTTGCAGACGCGTAACAATAACAGCCTTAGCGGTTTGCCAGAACACCGAAGAAGCTGTGTTAAAGTCAGCCTCCTTTTTATCGATATTCGCGTGAT
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| DNA Sequence for Gene |
>AW28_RS23270
ATGGCCGACTCCAGTCTTCCCGCAAGCCCTTCGAGCTTGAAAATCTATTTCCGCCTGCTTGGCTACGTGAAGCCCTATATCGGCTTGTTCGGGCTGAGTA TCATCGGGTTCCTGATTTTCGCTTCCACCCAGCCGATGCTCGGCTACATCCTCAAGTATTTCGTCGACGGCCTCTCCAATCCGAATGCGGTGCTGTTTCC GACGGTCCCTTACCTGCGTGACCTGCAGTTGCTACAGGCCGTGCCGCTGCTGATCATCGTCATTGCTGCCTGGCAGGGATTGGGTTCGTACCTGGGCAAT TATTTCCTGGCCAGGGTTTCGCTAGGGTTGGTACATGACTTGCGGGTGCAGTTGTTCAACAACCTGCTGACCCTGCCCAACCGCTATTTCGACAAACATA ACTCGGGTCACCTGATTTCCCGTATCACGTTTAACGTGACCATGGTGACGGGGGCGGCAACGGATGCGATCAAGGTCGTTATCCGTGAAGGCATGACCGT GATCTTCCTGTTCGCGTCACTGTTGTTCATGAACTGGCGCCTGACCCTGGTGATGGTGGCGATCCTGCCATTGATCGCGCTCATGGTCCGTACCGCGAGC AAGAAATTCCGCAAGCAAAGCAAGAAAATCCAGGTTGCGATGGGCGACGTGACGCATGTCGCCTCCGAGACCATCCAGAGTTATCGCGTCGTGCGCAGTT TCGGTGGCGAGGTCTACGAGCAGAAACGCTTCCTCCAGGCCAGCCAGGGCAATACCGACAAGCAGTTGCGCATGACTCGTACCGGTGCGATCTACACGCC GGTGTTGCAACTGGTGATTTACAGCGCCATGGCGGTGCTGATGTTCCTCGTCTTGTATTTGCGTGGAGATGCTTCGGCGGGCGACATGGTGGCCTACATT ACCTTGGCCGGTTTGCTGCCCAAGCCGATTCGCCAGCTGTCGGAAGTCAGTTCCACCATCCAGAAAGGCGTGGCGGGGGCCGAAAGCATCTTTGAGCAGT TGGATGTCAAGCCGGAAACCGATACCGGTACTATCGAGCGTGATGCTGTCAGCGGGCGGTTGGACGTGCGCCATCTGAGCTTCACCTACCCGGATACCGA CCGGCAGGTACTGAACGACATCAGCTTCTCTGTCGAGCCTGGGCAGATGGTTGCATTGGTGGGGCGTTCGGGCAGTGGTAAATCGACCCTGGCTAATCTG ATTCCGCGTTTCTACCACCATGACGAAGGCGAGATACTGCTCGATGGTGTTGAGATCGAACAGTACAAGCTATTGAATCTGCGCCGTCATATTGCCCAGG TGACCCAGCATGTAACGTTGTTCAGCGACACGGTGGCCAACAATATCGCTTATGGCGACCTGGCCGGTGCGCCGCGAGTCGATATCGAGAAAGCGGCTCA AGACGCCTATGCCATGGACTTCATCAGGCAGCTGCCTCAAGGCCTGGACACTCAGGTCGGGGAAAACGGCGTGTTGCTCTCCGGCGGCCAACGCCAGCGC CTGGCCATTGCCAGGGCCTTGTTGAAAAACGCCCCGCTGTTGATTCTGGACGAGGCGACTTCCGCACTGGACACCGAGTCCGAACGACACATCCAGGCTG CGCTGGACCAGGTGATGAAAGGCCGTACGACCCTGGTGATAGCCCACCGTCTTTCGACCATCGAAAAAGCCGATCTGATCCTGGTGATGGATCAGGGGCG CATTGTCGAGCGCGGGACCCATGGCGAACTCCTGGCGCAGAATGGTTATTACGCACGCCTGAATGCCATGGGGCTGGACGCTCCGGCCCAGGATATCGCC TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATACAAGTGGAACCTGCGGGGCTGGGCCGGCTCAGCCCCCAAAGGCATTTGTAACAAGGTCGATACCCATATTGACCAATCCACCATAAATCTACGACTC GCGCTTGGTAAGGTTCTGGCCACAGGACTTTCCTGGACTCACCTCTGTCATCGAGGGGGCACCCTCTCGCGCGAGTACTTGAATGCTGCAACGTTATCTC TGGAAGCTACTGCCCAAGTCGCAGCGCTCCTTTCTATTGGGGCGCCTGTCGGTTGTCGACCGACAGGTCGTGAACAAATCGATGTCGGCCAATTGCCGTT TCCCCGAAGCTTTCGCCCAGCGCGGCTGCCTGTTCATCCATGTGCCCAAATGCGCCGGCAGCAGTATTTGCGTGGGGCTTTTCGATGGCTACAGCCCGGG TCACCTGCCGTTGTATTGGTACGAAGAGCAGTTCGCAAAGCAGTACGCCGCCAGTTTCAAGTTTGCCTTTGTTCGTGATCCGCTGGAACGTGCATATTCG
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| Amino Acid Sequence |
>ATP-binding protein
MADSSLPASPSSLKIYFRLLGYVKPYIGLFGLSIIGFLIFASTQPMLGYILKYFVDGLSNPNAVLFPTVPYLRDLQLLQAVPLLIIVIAAWQGLGSYLGN YFLARVSLGLVHDLRVQLFNNLLTLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLFMNWRLTLVMVAILPLIALMVRTAS KKFRKQSKKIQVAMGDVTHVASETIQSYRVVRSFGGEVYEQKRFLQASQGNTDKQLRMTRTGAIYTPVLQLVIYSAMAVLMFLVLYLRGDASAGDMVAYI TLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVKPETDTGTIERDAVSGRLDVRHLSFTYPDTDRQVLNDISFSVEPGQMVALVGRSGSGKSTLANL IPRFYHHDEGEILLDGVEIEQYKLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPRVDIEKAAQDAYAMDFIRQLPQGLDTQVGENGVLLSGGQRQR LAIARALLKNAPLLILDEATSALDTESERHIQAALDQVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHGELLAQNGYYARLNAMGLDAPAQDIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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