Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGGCCCGCGTCAAGGCGGTGCTGCGTCGTCAGTCGGCGCCGGTACCTGGCGCGCCGGGTAGCGAAGATGAAAGCGTGACATTCGGCGACTATGAGCTGTC CCTGGCCACTCGCGAGCTCAAGCGCGGTGATGAGGTCCATATGCTCACCACCGGCGAGTTCGCGGTGCTCAAGGCCCTGGTGATGAACGCCCGCCAGCCG CTGACCCGGGACAAACTGATGAACCTGGCCCGTGGCCGTGAATGGGATGCGCTGGAGCGCTCCATCGACGTGCAGATTTCCCGTCTGCGCCGGATGATCG AACCCGATCCTTCCAAGCCGCGGTATATCCAGACCGTCTGGGGCGTGGGTTACGTGTTCGTGCCGGATGGCGCCGCCAGCAAGTGATCGGCGATTTGTAG GAGCGGGTGGCCTGGCCGGTTGAAATGTCTTCTTCCAGGCGACTCGCGGTCTGTCATTGTGCGAGCATCGCTCGCTCCTGCAAGTGTGTAGCGGTTATTC
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DNA Sequence for Gene |
>AW28_RS22090
ATGAAAACCCCCGTTTGGTTCCCCCAGAGTTTCTTCTCCCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTCTTCTCCAAGGCACTGACGCTGGTGTACC TGCTGATGAACGAAGACGTTCTCGTGGATCGGCAGTACAGTCACGGCGTTGCCTTGACCCTGCGGGCCTATTGGGCGGCGGACGAAACCAACCGAGCGAA AATTGCCGAGGCGGCGACGCTGATCCGCGTTGTCGGTGCCGGCGTGCCGGAGGGCGAGCAGCACTGGCCCTACAGCGAGATCTATCAACGCCAGATGCAG GCCGAACTGGGTGCCGATACCGAGGTGCGATTACGCATGCACTCGCCGCCGGCGCTGTGGGTACGAGCCCCGAGCCTGGGGGATGGCTGGCTGAAAGTGC CGTTGTACCCGCATCCGCTGCGCGGCCAGAAAATCTGGAACGTGCTCGGCTGGTTCCTGGCCATCGGCCTGCTGTCGACGGCGTCGGCGTGGATCTTCGT CAGCCAGCTCAACCAACCATTGAAACGCCTGGTCTACGCCGCCCGCCAACTGGGCCAGGGGCGCAGCGTGCGGCTGCCCATCAGCGATACACCCAGCGAG ATGACCGAGGTCTACCGTGCCTTCAATCAGATGGCCGAGGATGTCGAACAGGCCGGGCGCGAGCGTGAGTTGATGCTCGCTGGTGTCTCCCATGACCTGC GCACGCCGCTGACCCGGCTGCGGTTGTCGCTGGAGTTGATGGGCGAGCACACCGATCTGACCGACGAAATGGTCCGCGACATCGAGGACATGGACGCGAT TCTCGACCAGTTCCTGGCGTTCATTCGCGACGGTCGTGACGAGTCTGTGGAAGAGGTGGACCTAAGTGAATTGGTGCGGGAGGTGGCCGCGCCCTATAAC CAGAACGATGAGAAAGTGCACCTGCGCCTGGAGCCGATCCAGCCGTTCCCGTTGCGCCGGGTGTCGATGAAGCGTTTGCTGAACAACCTGATTGGCAATG CACTGAACCATGCTGGCACCGGCGTCGAAGTCGCGGCCTATGTCTCCGGTGACACCAGCGCGCCTTACGTGGTGCTGAGCGTCATGGACCGTGGCGCCGG CATCGATCCTTCTGAGCTGGAAGCCATTTTCAACCCCTTCACTCGCGGTGATCGCGCCCGGGGCGGGAAGGGCACGGGGCTGGGCCTGGCCATCGTCAAG CGCATCGCTTCGATGCACGGTGGCAACGTCGAACTGCGAAATCGTGTCGGTGGCGGGCTGGAAGCTCGGGTGCGCTTGCCGTTGGGCTTGATGCTGCCTC GGGATGCGGTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGATCTCCCTCAAGCAAGACAGAGAACCTGTGGGAGCAAGCTCAGCTCCCACAAAGGCTCACTTCCACAGGGTTTGTGTTGAGTCAGCCCTTGCCCTTGG TCCGGGTCATGTTCGGCCCGCCATTCTTTTCCAAATGCTCGATGATGATCCCGGCCACGTTCTTGCTCGTGGTGGTTTCGATCCCTTCCAGGCCTGGCGA GGAGTTGACTTCCATCACCAGCGGTCCGTGGTTGGAGCGCAGGATGTCCACGCCCGCCACGGCCAGGCCCATGACTTTCGCGGCCCGCAGGGCGGTCATG CGTTCTTCCGGGGTGATCTTTATCAGGCTGGCACTGCCGCCGCGATGCAGGTTGGAGCGGAACTCTCCGGGCTTGGCCTGGCGTTTCATCGAGGCAATCA CCTTGTCGCCGACCACGAAGCAGCGAATGTCCGCGCCACCGGCTTCCTTGATGTACTCCTGGACCATGATGTTCTGCTTAAGGCCCATGAACGCCTCGAT
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Amino Acid Sequence |
>ATPase
MKTPVWFPQSFFSRTLWLVLIVVLFSKALTLVYLLMNEDVLVDRQYSHGVALTLRAYWAADETNRAKIAEAATLIRVVGAGVPEGEQHWPYSEIYQRQMQ AELGADTEVRLRMHSPPALWVRAPSLGDGWLKVPLYPHPLRGQKIWNVLGWFLAIGLLSTASAWIFVSQLNQPLKRLVYAARQLGQGRSVRLPISDTPSE MTEVYRAFNQMAEDVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMGEHTDLTDEMVRDIEDMDAILDQFLAFIRDGRDESVEEVDLSELVREVAAPYN QNDEKVHLRLEPIQPFPLRRVSMKRLLNNLIGNALNHAGTGVEVAAYVSGDTSAPYVVLSVMDRGAGIDPSELEAIFNPFTRGDRARGGKGTGLGLAIVK RIASMHGGNVELRNRVGGGLEARVRLPLGLMLPRDAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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