Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTGGTCTTGGCGATCAGCTTCGTTTCGAAATCCAGCCCCGGCGACATGTCCCAATAGGCATGGCTGGGCCGCGCATAGCAGTAGATGCAGCCGTGTTCGC AGCCTCGGTACGGGTTGATCGAGCGGTCGAAGGGAATATCGGACGAGGTGTTGCGGGTAATGATGGTCTTGGCCATTTCGATGCGCACTTCAGTGCCCTG GGTCGGCGGGACTTCCTGATACCAGCCGTCATCTTCGGCCACCGAGCGACTCGGGGCGAAGCGGTTGTGCGGGTTGGTCGCGGTGCCGCGGCCGCGAGGC GGAAGTGAAGCTGACATGGGAGCACTCCGAAAGGCTGTATGTGCATACAGTATTCGTTGCATTCGATTAAGACCAGTGCCATTCAGCAGCCCGAATACCC GATCATCGTTCACAACGCTTTGACGTTCTCCTCACAGGCTTTTAACCGCAGCGAGCCGAAACTGTCGATCTCGCATTCCTTCGTTTTCGGTCGTCCGTGC
|
|
DNA Sequence for Gene |
>AW28_RS21145
ATGCTCAAGCTCTGTTCCCGTTCACTGCTCTGCCTGGCCTTGCTCATCGGGCTGGCCAAGATCCCCGCCCAAGCGGCCGATTCCCCTGATGCGAGGCCCG CTGAATGGGCGCAGCCGGTGGAAAAGGACTACAACCTCTACCAGATGTCACCGACGCTCTACCGCAGCTCCCTACCGGATGGCGCAGCGCTGCCCTTGCT GACCAAACTCAGGATTGGCACGGTCATCACCTTCCTGCCGGAGTCGGACAAGCGTTGGCTGTCCACCCCGGGCATCGAGCAAGTGCAGTTGCCCTATCGC ACCAATCATGTCGATGACAGCGACATCCTCAGGGCTTTGCGCGCCGTCCAGGCGGCCGAAGCCAAGGGGCCGGTGCTGATGCACTGCAAGCACGGCTCGG ACCGCACCGGGCTGGTCGCCGCCATGTACCGGGTGGTGGTGCAGGGTTGGAGCAAAGAGGACGCCTTGAACGAAATGACCGAAGGGGGCTTCGGTGACAG TCATCACTTCAAGGACGGGGTGCGCTACATGATGCAGGCCGATGTCGACAAACTCCGTGTGGCGCTGGCGAATGGCGATTGCAGCACCAGCGTCTTTGCC CTTTGCTCCCTGGAAAGCTGGGTCAACTCAACCACGACGACGCGTCACCTCGACCCTCAGGTTGTGCTTCCCGAGCGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGCTACGTGCCCAGAAACGCCGTGATCGACTCAGACAGCGGTCGCGAATCGCCCGGCCCGAAAATCGTCTCGCGCAACGCCTGCCCGGTTTCCCGGTTG AACAGCCCGTCGCGCTTGAATCTCTGGAACACGGTTTTCGCCAATTCCCTCGACCAGGCATAGGCATAGAGCCCGGCACCATAGCCGGTCACCATGTAGT CCAGGCCATTGGGCCAGCGTTCGGTTGCAGACACCGGCAAATGCCCGACCTGCGCGCTGACTTGGTCGAATACGTGTTGGGCGGTGCGTCCATCGCCGTG GCTGTGGTGCAATTCCATGTCGAACAGCGCATCGCGCAAGAACGAGGCGCTGTCCCAACTGGTCTGGGTATGGAGGTAGACCAGCAATTGATCGGCGAGG GTGTCCGGCAAGGGCGCCCCGGTTTGGTGATGTTTCGAGATACGCATCAGGCAGGGTTTGGCGAAGCACCATTGCTCGAACAACACCCCGGCGAATTCGG
|
|
Amino Acid Sequence |
>protein phosphatase
MLKLCSRSLLCLALLIGLAKIPAQAADSPDARPAEWAQPVEKDYNLYQMSPTLYRSSLPDGAALPLLTKLRIGTVITFLPESDKRWLSTPGIEQVQLPYR TNHVDDSDILRALRAVQAAEAKGPVLMHCKHGSDRTGLVAAMYRVVVQGWSKEDALNEMTEGGFGDSHHFKDGVRYMMQADVDKLRVALANGDCSTSVFA LCSLESWVNSTTTTRHLDPQVVLPER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|