Pseudomonas brassicacearum PA1G7, AW28_RS20855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 300 | 323 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 391 | 690 | 2.2E-73 |
| Coils | Coil | Coil | - | - | 458 | 478 | - |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 526 | 691 | 2.8E-52 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 165 | 194 | - |
| Coils | Coil | Coil | - | - | 5 | 25 | - |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 537 | 690 | 2.75E-50 |
| Coils | Coil | Coil | - | - | 504 | 531 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 521 | 692 | 1.9E-62 |
| Coils | Coil | Coil | - | - | 416 | 436 | - |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 533 | 689 | 3.22359E-65 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 532 | 688 | 1.8E-46 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 530 | 690 | 8.6E-50 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 521 | 691 | 8.0E-59 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.