Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGTCACGCCCAGGTGATGATCGAGGCCTCACGCCAGGCCAGACGCGTGCTGGTGGTCCCCAGCTTGCGGCATCCCTACGGCAAGCAAATGGTCGACTAT GAGGTTCGCCTGAACTGGCTGGAATCGATCGTCGAGAACGTTCAGCCACTGTGCTGCGCCGAAGTGCGTGCAAGCCGGGTGGAACAGGTCGTGGCCCGTG GCGTTGAAGGCGCAATCTACAGCTACACCCTGCTCGCCCACCTCGCCGACAGCCTGGCCATGGACGGCAAGCGGATTGCGTTGGTGGTGGGTCAGGATGT TGCGGATCGGCTGCCGACCTTCTACCGCGGCCAGGAATTGCTGGAGCGTTTTTCCATTCTTTGCGTGGAGGAAAGGATCCACGTGCGCAGCACGGTGGTT CGCGACCGACTGGCTTTGGGCAAACCGCTTCCCAGCGACTGGATGGCACCGGGCATGAACCCGTTAAACTATGGTCTTTACGCTCCCCACGGAAATCGAC
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DNA Sequence for Gene |
>AW28_RS20510
ATGCCCACTAGCACAGCCCCCGCGCGCGGTTATCTGCACACCATCGACCTCTGTGTGCTGCGCTTCTGCCGGGAAACCCACGCACTGGAAATCCTCCTGA ACCGACGGGAAGCCGAGCCGTTTGCCGGCCATTGGGCGCTGCCCGGGATCGTGGTCAATGGTGACGTCGAAGATCTCACGCTGAACGACGCCGTGGAGCG CCTGCGTAACTCAAACAAGGTCGGCATGCCGCTGGCCTGGATCGAACAGGTCGGCACCGTCGGCGACGCGTTCCGCGATCCGCGCTGCTGGTCGTCCTCG ACGTTCTACCTGGCGATTGTCAGCGAGGCGGTCCAGCTCGCCGAACACCAGGGATTTTTCCCCCTCAAGGACGTCGCTGACGCCTCGATCAAACTTCCTT TCGACCACAACAGCCTGGTGGCTGCAGTCCAGGAGCGGTTGTTGTCCAAAGCCCTCTATAGCAGCCTGCCGCTGATGTTCCTGGGCCCGGAATTCAGCGC GCCGGAAGCGGTGGGCATTTTCTCCGTGGTGCTCGATCGCCCGGTACTCAAGACCAGCATGCGCCAGCGTTTGCTGAAGATGACCGACGCGGGTTATTTG CAGGAAACCGGTCGCAAAAAAAGCGGTGACGGCGGCCGCCCGCAACGCACGGTGGAAAATCTCAAGCCGACCAGCGTTTATCTTTTTGATCGTTGTTTTC TGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGTCAGCGGGCAAGCGCGAATGCTGGCGCTATGCGCTCCTGCTCATTGCTTGAGATTCCCAGATAGCGCGCGACTCTGGGCCATTTCCTGACGACGCCC TGAAACCTCTCGATGGTTTGTCTGGCATCGTCAGCAGACACTCGGAAGTAGCCTGCCACGCTCATTGCCAAATCAAGGTCCATGGCGTTATCTGCCTCTG AAACGTTGAGCCTCAAGCCAGTATCACCAGGGACAGGGTTCATGTCATACGCAGGTGAAAGACGCCAACCGCGTCCTGGCTCCAATAGGAAGCCATGGTT TCGTAGATGATCGTCAGTATTCGAAACCAGCATATTGAAGACAATTCTTCGCCAAAGCTCGGGAATATCTACGTCGGGAGCGGCACCCTCCCTCACCAAT ACCTCTGCAATCTCCAGATAACTCGCCCCCGTCTCATGCCCATCACCATCTTGATGGTCCGTCAGGGTCATCGCTGAAGCAAAATGAAATCGTCCACCCG
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Amino Acid Sequence |
>ADP-ribose pyrophosphatase
MPTSTAPARGYLHTIDLCVLRFCRETHALEILLNRREAEPFAGHWALPGIVVNGDVEDLTLNDAVERLRNSNKVGMPLAWIEQVGTVGDAFRDPRCWSSS TFYLAIVSEAVQLAEHQGFFPLKDVADASIKLPFDHNSLVAAVQERLLSKALYSSLPLMFLGPEFSAPEAVGIFSVVLDRPVLKTSMRQRLLKMTDAGYL QETGRKKSGDGGRPQRTVENLKPTSVYLFDRCFLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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