Pseudomonas brassicacearum PA1G7, AW28_RS20090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACAGCGGCCACCTGGCAGCGCAAACCCGCTACCCGGACGGTTTGAAGGCAATCCTCGGCGAGTACTTCGGCCTTCCGGTGGAGATCGAAGAATACGTC GGCCAATGGCTGGAACTGCCCGAACGCAGCCGCGTCGGGGTCAGCGCTCATCAATTGGGCGTGGACTTCTGCCTGGGCCGCTTCGTGTGGGATCGCCAGC ACAAATTCCGCATTCGCCTGGGGCCACTCAAGCTCGTTGACTACATGGGCATGCTGCCTGGCAGCCAACCGTTCAACGAGCTGGTGGCCTGGGTCGCCGA ATACCTGGGCCATGAACTGGACTGGGACCTGAACCTGGTCCTGGAACAGCCCGAAGTCCCGGCATTGCAACTCAATGGGCGTTTCCGCCTGGGTTTCAAT ACCTGGCTGGGCCGCCCCGAAACAGATGCCAACGATTTAATACTGGCCCGGCATTACGCCGAACAGGCCAACACCTCACAGACCTCAAGGAGCCATGAGC
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| DNA Sequence for Gene |
>AW28_RS20090
ATGGGTGAAATCAGTCGCGCCGCGTTGTTCGGCAAACTCAACAGCGTGGCCTACAAAGCCATCGAAGCCGCCACCGTGTTCTGCAAGTTGCGCGGTAACC CTTATGTGGAACTGGCCCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGCACCGCATCATCCGCCAGTTCAACATCGAACCGGCGCGCCT GGCCCGTGACCTGACCGAAGCCCTGGATCGCCTGCCACGGGGTTCGACGTCCATCACCGACCTGTCGTCCCACGTCGAAGAAGCCGTGGAACGCGGCTGG GTCTACGGCAGCCTGATGTTCGGCGAAAGCCAGGTTCGCACCGGTTACCTGGTGCTGGGCATTCTCAAGACCCCGAGCCTGCGCCACGCACTGCTGGGCT TGTCGTCGGAGTTCGATAAGGTCAAGGTCGAAGCCCTGAGCGAACGGTTTGACGAATACGTCGGCGACTCGCCGGAAAACGCCCTGACCGCCAGCGACGG CTTCAATGCCGGCGCGGTGCCGGGCGAAGCCAGCGGCGCCATGGCCCCTAGCGCCATGGGCAAGCAGGAAGCCCTCAAGCGCTTTACCGTCGACCTCACC GAGCAGGCCCGCAGCGGCAAGCTCGACCCGATCGTCGGCCGTGACGAAGAGATCCGCCAACTGGTGGACATCCTCATGCGCCGCCGGCAGAACAACCCGA TCCTTACCGGTGAAGCCGGCGTGGGCAAGACCGCCGTGGTCGAAGGCTTCGCCCTGCGCATCGTCGCCGGCGACGTGCCGCCGGCCCTCAAGGACGTGGA ACTGCGCAGCCTCGACGTGGGCCTGTTGCAGGCCGGCGCCAGCATGAAAGGCGAGTTCGAACAGCGCCTGCGCCAGGTCATCGAAGACGTCCAGGCCTCG CCCAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTCGGTGCCGGTGGCGCCGCCGGCACGGGCGACGCGGCCAACCTGCTCAAGCCGGCGT TGGCCCGTGGCACCTTGCGCACCGTGGCCGCCACGACCTGGGCCGAGTACAAGAAGCACATCGAAAAAGACCCGGCCCTGACCCGCCGCTTCCAAGTGGT GCAAGTGGCCGAGCCGTCGGAAGACAAGGCCCTGCTGATGATGCGCGGCGTGGCCTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGACGAAGCC CTGGAAGCTTCGGTCAAGCTGTCCCACCGCTACATTCCCGCGCGCCAGCTGCCGGACAAATCCGTGAGCCTGCTGGACACCGCCTGCGCCCGCGTCGCCA TCAGCCTGCACGCCGTACCGGCCGAAGTGGACGACAGCCGTCGGCGCATCGAAGCGCTGGAAACCGAGTTGCAAATCATCGCCCGTGAACACGCGATTGG CGTGGTCATCGGCAACCGCCAGACCCAGAGCGAAACCCTGCTGAGCGCCGAGCGCGAACGCCTGGCCGAGCTGGAAGGCCGCTGGGCCGAAGAGAAAACC CTGGTGGACGAACTGCTCGCCACCCGCGCCACCTTGCGCGAACGCGTTGGCGTGGTGGACAGCGAAGACAACAGCGAAGCTTCTGACAACGAAAGCCACC AACTGCGCGAGAAGCTGGTGGACCTGCAACAGCGCCTGACCGCCCTGCAAGGCGAAACCCCGCTGATCCTGCCGACCGTGGATTACCAGGCCGTGGCCTC GGTGGTCGCCGACTGGACCGGTATCCCGGTGGGCCGCATGGCCCGCAACGAACTGGAAACCGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATC GGCCAGGACCATGCCTTGCAGATGATTGCCAAGCGCATCCAGACCTCCCGCGCCGGCCTCGACAACCCGAGCAAGCCGATTGGTGTGTTCATGCTCGCCG GCACCTCCGGCGTGGGCAAGACCGAAACCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTCATCACTATCAACATGAGCGAGTTCCA GGAAGCCCACACCGTATCGACCCTCAAGGGTGCGCCACCGGGCTACATCGGCTATGGCGAAGGCGGCGTGCTGACCGAAGCCGTGCGGCGCAAACCGTAC AGCGTGGTGTTGCTGGACGAGGTCGAGAAGGCCCACCCGGACGTGCATGAGATCTTCTTCCAGGTGTTCGACAAAGGCGTGATGGAGGACGGTGAAGGCC GGGTGATCGACTTCAAGAACACCTTGATCCTGCTGACCACCAACGCCGGCACCGAGTTGATTGCCCAGGTCTGCAAAGACCCGCAGAACGTGCCCGAGCC GGAAGAAATCGCCAAGGCCCTGCGCCAACCGCTGCTGGAGATTTTCCCGCCAGCCTTGCTGGGCCGCCTGGTGACGATCCCGTACTACCCGCTCAGCGAC GAGATGCTCAAGGCCATCACCCGCCTGCAACTCAACCGCATCAAGAAGCGCGTGGAAAGCACCCACAAAGTCGCCTTCGACTACGACGACGCGGTGATCG ACCTGATCGTCTCGCGTTGCACCGAAACCGAAAGCGGCGGGCGCATGATCGACACCATCCTGACCAACAGCCTGCTGCCGGACATGAGCCGCGAGTTCCT GACCCGCATGCTCGAAGGCAAGGCTTTGGCCGGGGTGCGGATCAGCGCCGTGGACAATGAATTGCAGTACGATTTCAGCGACGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGAAGGAGCACCGCATAACCCTGTGGGAGCGAGCTTGCTCGCGAATGCAATCTGTCAGTGCCATTGATGTTGCCTGACACACCGCCTTCGCGAGCAAG CTCGCTCCCACAGTTGTTCCGGTGTCGTCAGGCAATCAGCGGCGCAGCCATTACAACGATGAGATGACCGATGTTATTCAACCAAGCCTCACGCCTGGCC AAGATCACCAGCCCCCTGGGACCTGAGGTACTGCTGCTCAAGGACATGGGCGGCGGCGAAGAACTGGGGCGGCTGTTCAACTATGAGTTGCAGCTGCACT CGCTGGATAACGCCATCGACCTCAATCAGGTGCTCGGCAAGCCCATGTGCGTGAGCCTGCAACTCGATGGCGGTGGCGAGCGTTATTTCCATGGCATCGT GGCCCGTTTCAGCCAGAACGTCGACCAGGGCCAGTTCGCCAGTTACCAGGCCACCCTGCGCCCGTGGTTTTGGCTGCTGACCCGTACCTCCGATTGCCGG
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| Amino Acid Sequence |
>ATPase AAA
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGW VYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPENALTASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLT EQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGNRQTQSETLLSAERERLAELEGRWAEEKT LVDELLATRATLRERVGVVDSEDNSEASDNESHQLREKLVDLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRII GQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPY SVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSD EMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISAVDNELQYDFSDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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