Pseudomonas brassicacearum PA1G7, AW28_RS18775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCCGAACCTCTCGGTGATCCTGGAAACCCTGACCTTGCACGGCAAGCAGCAGATCATGATCCAGGGTTACCTGCCGGCCATCGTCGATGGCGACAAA CGCATCCTGATGATCGACGGCGAACCGGTGGACTATTGCCTGGCGCGCATCCCGGCAGCCGGCGAAACCCGCGGCAACCTGGCGGCTGGCGGGCGTGGCG AGGCGCGTCCGTTGACCGACAAGGATCGCTGGATCGCCGCCCAGGTCGGCCCGACCCTGCGCGAAAAAGGCCTGCTGTTCGTGGGCCTGGACGTAATCGG CGAGCACCTGACGGAGATCAACGTCACCAGCCCGACCTGCATCCGCGAAATCGACAATGCCTTTGGCACCGACATCGGTGGCATGCTGATGGATGCCATC GATCAGAAGCTCAAGGCTCGTTGATCCAGATCTGCTGAAGGAAACCCACATTGCGTTATCATGCCCGGCCTGAAAAAAACGCGATGTTGGTTTCCTTGTC
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| DNA Sequence for Gene |
>AW28_RS18775
ATGACACTCCCGTCCGATCTGCCCCAAGAGCTCGCCCATCGTAGCGTGCGCCCGGCTGATCGCCTCGGTTTTACCCTGTTCCTGGCGGCGTTGATCCACC TGGCCCTGCTGCTGGGCGTCGGTTTTGCCACGGTCGAGCCCAAGCAGATCAGCCAGACCCTGGAAATCACCCTGGCCACCTTCAAGAGCGAGACCAAGCC CAAGAAGGCCGACTTCCTCGCCCAGGAAAACCAGCAAGGCAGCGGCACCCTGGAAAAAAAGGCGATCCCCAAGACCACCGAGATCGCGCCGTTCCAGGAC AATACGGTGCAGAAAGTCACCCCGCCGCCAGCGGCCAAGCCCGAAGTGCAGGAGACGGCGCCCAAGGCAGCCGTGACCACCGTGGCGCCGAAGCCGAAAA AGGCCCCGGTCAAGGAAGAGGTCAAGCCTGATCCCAAACCCAAGGCCCCCGAACCCACCTTCGACAGCTCACAGTTGTCCAGCGACATCGCCAGCCTGGA GGCCGAACTGGCCCAGGAGCAACAGCTCTACGCCAAGCGCCCGCGCATCCACCGCCTGAGCGCCGCCTCGACCATGCGCGACAAGGGCGCCTGGTACAAG GACGAGTGGCGCAAGAAGGTCGAGCGCATCGGCAACCTCAACTACCCCGACGAAGCCCGGCGCAAACAGATCTACGGCAACCTGCGGCTAATGGTCTCGA TCAACCGTGACGGCTCGCTGTATGAAGTGCTGGTGCTCGAGTCTTCCGGCCAGCCGCTGCTGGACCAGGCGGCCCAACGGATCGTACGCCTGGCCGCACC GTTCGCGCCGTTTACCGGGGACTTGTCGGACATCGACCGGCTGGAAATCATCCGCACCTGGAAGTTCGCCCGCGGCGACAAGCTCTCCAGTAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGCCGCCGAGCCCTGCAGGCTCACCCCAGATCGAATGTGGGAGCGAGCTGTCTGGGAGCAAGGCTTGCCCGCGATGAAAACGCCGCAGTCTCTTGAGG ACCGCAGCGCCTGGATCGCGAGCAAGCTTTGCTCCCACACAGCTCGCTCCCACAGGGGATTGGTGACAGTCTCAGGCATTTCCCGGCTTGTCAGTTCGCC CCCGCCCCGCCACACTAGCGCCTATGAAAAACGTCAGCCCCACCTACCTCAAGCATCACTTCCTGATTGCCATGCCGCACATGGCCGATCCGAATTTTGC CCACACCTTGACCTACATCGTCGAGCACACGGCCAATGGGGCCATGGGGCTGGTAATCAATCGCCCGCAGGAATTGAACCTGGCGGACATCCTGGAGCAG TTGCGCCCCGAAGTGGAACCGCCACTCTTGTGCCAGCATGTGCCGATTTTCATCGGCGGCCCGGTGCAGACCGACCGCGGTTTCGTGCTCCATCCGTCGG
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| Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MTLPSDLPQELAHRSVRPADRLGFTLFLAALIHLALLLGVGFATVEPKQISQTLEITLATFKSETKPKKADFLAQENQQGSGTLEKKAIPKTTEIAPFQD NTVQKVTPPPAAKPEVQETAPKAAVTTVAPKPKKAPVKEEVKPDPKPKAPEPTFDSSQLSSDIASLEAELAQEQQLYAKRPRIHRLSAASTMRDKGAWYK DEWRKKVERIGNLNYPDEARRKQIYGNLRLMVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLSDIDRLEIIRTWKFARGDKLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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