Pseudomonas brassicacearum PA1G7, AW28_RS18745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCGAAGTGGTGCGCGGTGCGCGACTGGCCCAGGACGCCGGCGTTGCCCTGGAAGAAATCGAAGGCGTGTCCAAGACCCTGGCGGCGCTGATCCAGAG CATTTCCAATGCGGCGCAGCAACAGACCACCTCGGCGGGGCAGATTTCCTTGACCATGAACGTGATCCAGCAGATCACTTCGCAGACTTCATCCGGTTCC ACCGCCACTGCCGAGAGCATTGGCAACCTGGCGAAAATGGCCAGCCAGCTGCGTCGTTCGGTGTCGGGGTTCACGTTGCCGGCGGCAGCGGCTGGCGATG AGGAAAAGGGGTGACCAACCGGATCCATCCGTTGGAAAAGGCTTTTTGTGGCGAGGAGGTTTCTGTGGGAGCAAGGCTTGCCCGCGATGAAGATAACGCG GTTCTTCGGGAACCGAGGTGTTTGCATCGCGAGCAAGCTTTGCTCCCACAGGTAAATCCCTTCCCCGCGGGCGTGTTGTGTTCTCCTGATTGGAGTGGTT
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| DNA Sequence for Gene |
>AW28_RS18745
ATGGGTGATCGGCACGACTATGTGGCCCTGGAATGGGTCAAGGGCGAGATTGCCGAAACGCTGAAGCAGGCTCATCTGGCCCTCAACCGCCTGGTGGACG ATCCGCAGGCGTCGGACGCCCTCGGGCAATGCCTGGCCTGCATTCACCAGGTCCACGGCGGCCTGCAGATGGTCGAATTCTACGGCGCGGCGCTGCTGGC CGAGGAGATGGAGCAACTGTGCGCCGCCCTGCAGGACAACCGCGTCACCCATCGCGACGAAGCCATCAGCCTGTTGAGCCAGGCCCTGGGGCAGTTGCCG ATCTACCTGGACCGCGTACAAGGTGCCCGTCGCGATCTGCCGCTGGTGGTGCTGCCCTTGATCAACGACCTGCGCAGTGCCCGGGGCGAAAGCCTGTTGT CGGAAACCAGTCTGTTCAGCCCCGAGTTGCCCGATATTGCGCCGCTCAGCGACGAGGCCTTGCAGCGCCTCGAACCCGCTGACCTGCCAAACACCTTGCG CAAATTGCGCCAGACCCTGCAAATGGCCCTGGTGGGCCTGCTGCGCGAACAGGACGACGCAACCCACCTCGGTTACCTGGCCAAGGTCTTCCATCGCCTG GAAACCTTGTGTACTGGGGCGCCGCTCAATGCGTTATGGCAGGTGGCCTCGGCGCTGGTCGAAGGCATGCGTGACGGACGTATCGCCAACAGCCCGGCGC TGCGCAGCCTGTTCAAGGAAGCCGACAAGGAACTCAAGCGCCTGCTGGACCAAGGCATGCCAGGCATCAATCAGCCGGCACCGCCCCACCTGCTCAAGAG TTTGTTGTTCTATATTGCCAAGGCCGAACATCCCAGCGGGCAGATGCAGATCATGAAAGAACGCTACTCACTGGACGACGCGCTGCCCGACAGCGCCATG GTCGACGAAGAACGCGCGCGCCTGGCCGGGCCCGACCGCGATGCCATGCGCTCGGTGCTTGCCGCGCTGTGCGAGGAACTGGTGCGGGTCAAGGAGCGCC TGGACCTGTTCGTGCGCAGCGATCGCCAGCACGCCTCGGAGCTGGACAGCCTGTTGGCGCCGCTGCGGCAGATCGCCGACACCCTGGCGGTGCTCGGTTT TGGCCAGCCACGCAAGGTCATCATCGATCAACTGGCCGTGGTCCTGAGCCTCGCCCAGGGCCAGCGCAAGCCGGATGACGCGACCCTCATGGACGTCGCC GGGGCCTTGCTCTACGTCGAGGCGACGCTGGCCGGCATGGTCGGCACCGTCGAGCCCGAGAGCCGCGAAGACACCCACCTGCCCACCACCGACCTGACCC AGATCCACCAGATCGTCATCAAGGAAGCCCACACCTGCCTGCAACAGGCCAAGGACATGATCGTCGACTACATCGACGCGGACTGGAACCGCGAGCAACT GCAGCCCTTGCCGGCGTTGCTGACCCAGGTGCGTGGCGCGCTGGCGATGATTCCCCTGAGTCGTGCCGCCAGCCTGGTGGAGGCTTGCAACGGTTTCATC CGCGAGCATCTGCTGCTGGATCAGGCCCAGCCGGGCTGGGAAGAACTCGACCACCTGGCTGACGTGATCACCGGTCTCGAATACTACCTGGAGCGCTTGA GCGAGGACCCGGAAACCCCCGGCGAGCCGTTGCTCGACGGGGTCGAGCGGAGCTTGGCTGCGCTCGGTTATTTTCCTGACGAAGCGCGGGTGCCGGTGCT CGACGATGTATTGAGCCCCAACGAAGCCCAGGTCATGCAGGACTTGCAGGAATGGGACGACCCGCAGACGGTGCAATCCTTGGCCGAGGTGCTGGCCAGC CCGATCTCGGCGGTCAATCCGCCAGCCAAGAGCACCCCGGGCAGCCTGTTGCCGCCACCGTTGGATGAAAGTCCGGTGGACGATGAGTTGCGCGAGGTCT TCCTCGAGGAAACCGGCGAGGTGCTGGACGTCCTGCGTGAATACCTGCCGCGCTGGAGTGCGCATCCCGACGACCACGGCGCCCTGAGCGAACTGCGCCG GGCCTTCCACACCCTCAAGGGCAGTGGCCGGATGGTCCGGGCGCTGGTGCTGGGTGAACTGGCCTGGGCCGTGGAAAACCTGCTCAACCGGGTCCTGGAG CGCAGCGTCGAGCCGCAGGCCTCGGTCCGTCAGTTGATTGAGGACACGGTGCAGTTGTTGCCGGCCCTGGTGGCCGAATTCGCCGCCAATCACCAGCGCC AGCGCGACGACGTCGACCGCTTGGCCGCCCGCGCGCATGTCCTGGCCAAGGGCGGCGATGAGAAGGATGAAGACGAGCAGGACGTGGCCGCCCTCGATCC GCTGCTGTTGAAGATCTTCGACAGCGAAGCCCAGGGCCACCTCGCCAGCCTCAATCGCTTTCTCGATCAGTCGGCCGACCACCTGCCCCTGCAGGCCAGT GATGAGTTGCAGCGGGCCTTGCATACGCTCAAGGGCAGCGCGTCGATGGCCGGCGTGCTGCCGATCGCCGAGCTGGCCGGGGCGATGGATGAGCTGGCCC GGGAATACCGGGCGCATCTGATTGCCCTCGATCTGGATGAGGTCGAATTGCTGCTGGAAGCCGAAGGGCTGCTGCGCCGGGGCCTGCGCCAGTTGCACAG CGAGCCGCTGGCAGCGATCCCTGGCGCCGAGGATCTGATCCAGCGCGCCCAGGCCCTGCTGGCCGAGCGTCTGCACGCCGCCAACAGCGCGCCGGACAAA GCGCTGCGGACCAAGCGCGACCCACAACTGATCAACAACTTCCTAGCCCAGGGCATGGACATCCTGCTGGACGCCGAAAGCCTCTTGCAGCGCTGGCAGC AGCACCCCGGCGAAGGCCAGGAACTGAGTGCGCTGCTCGATGAGCTGACCACCCTCGGCGAAGGCGCGCACCTGGCCGACTTGCACCCGGTGGACGAACT CTGCGAAGCCTTGCTCGACCTTTACGGTGCGGTAGAGGAAAGCAGCCTGGCGGTCAGCGATGAATTTTTCCAGGAAGCCCAGCGCGCCCATGAAGCGCTG ATCGATATGCTCGATGAGCTGGCGGCCGGGCAGCATGTGCATCCGCAGCCCGAGCGGGTACAGGCCCTGCGTCGCTTGCTTCAGGAGAGCCTTGATCCAT CGGCCACCGGCCTGATCCGCAGCGACGGCAGCCGCACCCTGAGCATCCGCGAACTGGGCCACGCGACGGCGGAAATGGAGCGTGACGCGCCCGTCGATAC CTCGATGGAAGATGACCTCGCGGCGATTTTCCTCGAAGAAGCCCAAGACATCCTCGAAAGCGCCGCCCAGGCCTTGCAACGCTGGTTGGCCGATCCGGAT AACGGCGCACCGCTGTCCTCGCTGCAACGTGACTTGCACACCCTCAAGGGCGGTGCGCGAATGGCCGACATCCGGCCGGTGAGCGACCTGGCCCAGGAGT TGGAAAACCTTTACGAAGGACTGGTGGACCGCCGCTACAGCTACAGCGAGGAACTGGCGCAACTGCTTGCCAGCAGCCACGAACGCCTCGACCTGTTGCT CGGGCAGTTGCAACAGGGCCAGCCGTTGGGCGATCCCGTTGCGCTGATCGACGCCATTCGACGGTTCCGCCAGGACAAGCCGAACGCCATCGAGACGAGC GCAGCGGCCCAGGCCGACGGCGCCGGCCATGATCCCGAGTTGCTGGAAATCTTCCTTGAAGAAGGCTTCGACATCCTCGACAGCTCGGGCGCGGCGCTGC TGCGCTGGCAGGAAGAACCGTCGAATCGCCAGGCCGTGGAAACCTTGCTGCGGGATTTGCACACCCTCAAGGGCGGTGCGCGCATGGTGGAAATCGGACC CATCGGCGACCTGGCCCACGAGTTGGAAAATCTCTACGAAGGCCTGTCGGCAGGCCTGCTTCAGCCGACCCCGGCGCTGTTCACTTTGTTGCAAAGCAGT CATGACCGATTGGCGCAGATGCTCGATGCAGTACGCGCAGGCCACCCGTGCCCGTTGGCGGACCGACTGATCGCGCAGATCCAGGCGGTGAATCATCCCC AGGAGAATGCTGCACCGCAGGCTGTCTCGGCGCCGGAACCGGTGCCCACTCCCATCGTCAGCCCGCCTGCGGCGCCTGCAAGACCGGACCCCAGCGCAGC GGGCGACGGTGCGGACATGGTCAAGGTATCCGCCGAACTGCTCGACGACCTGGTGAACCTGGCGGGCGAAACGTCGATCTTCCGTGGGCGTATCGAACAG CAGGTCAACGACGGGCGCGTGGCCCTGGGCGAAATGGAAACCACCATCGAGCGCATGCGCGATCAGTTGCGGCGCCTGGATACCGAAACCCAGGGGCGGA TTCTCAGCCGGCAACAGGTGGAGGCCGAGCGCCTGGGCTATGAAGAGTTCGACCCGCTGGAGATGGACCGCCACTCCCAGTTGCAGCAGTTGTCCCGGGC ACTGTTCGAGTCCGCCTCGGACTTGCTTGAGCTCAAGGAAACCCTCGACCGCAGCAATCACGATGCCGAGGTCCTGCTGCAACAGCAGGGGCGTATCAAC ACCGAGCTCCAGGAAGGCCTGATGCGTACGCGCATGGTGCCGTTCGAGCGCATGCTGCCACGGCTCAAGCGCATCGTCCGGCAAGTGGCGCAGGAGCTGG GCAAGGACGTGGAATTCCTGGTCGGCAACGCCGACGGCGAGATGGACCGTAACGTGCTGGAGCGCATGGCTGCACCTCTTGAACATATGCTGCGCAACGC CGTCGACCACGGCCTGGAGCCGGCTGACGTGCGCATCGCCGCCGGCAAGCCGGCCCGAGGACGTATCAGCCTCGATCTGTCCCGGGAAGGCGGCGACATC ATTTTCGACATCCGCGACGACGGTGCCGGGGTGCCGCTGGAGGCTGTGCGGAACAAGGCGATCAAACGTGGCTTGCTGGCGCCGGACAGCGACATCAGCG AGCGCGACGTGCTGCAGTTCATCTTGCAACCAGGGTTTTCCACGGCCGAGAAAATCACCCAGATATCCGGGCGCGGTGTCGGCATGGACGTGGTCCACGA AGAGGTTCGGCAACTGGGCGGCAGCATGGTCATCGATTCCACGCCGGGGCAGGGCGTGAATTTCCGCATTCGCCTGCCGTTTACCGTGGCGGTGAACCGG GCGTTGATGGTGCACTGTCACGAAGACCAATACGCGATCCCGCTGAACACCATCGAGAGCATTGTCCGGGTGTTGCCCGCCGAACTGGACGGCTATTACC AGCTCGACCCGCCGACCTACACCTATGCCGGGCAGCGTTACGAGTTGTGCTACCTCGGTGAGCTATTGAAAACCGGCGCCCGGCCGAAACTGCTGGGCCA GAGCCAGCCCTTGCCGGTGCTGCTGGTGCAGTGCAACGAGCGGCACGTCGCCGTGCAGGTGGACGCTACCGCCGGGACCCGGGAGATCGTGGTCAAGAGC CTCGGCCCGCAGTTCTCGGCGGTACAGGGCCTGTCCGGGGCGACGATCCTGGGGGACGGCCGGGTGGTGTTGATTCTCGACCTGCTCGCGCCGATCCGCG CCTTGCCCCACCAGGTCCCGCGCCGCCAAGTGCCGGTAGAAGGCGAGGGCGAATCGCAACGGCCGCTGCTGGTGCTGGTGGTGGACGACTCGGTGACCGT GCGCAAGGTCACCAGTCGCCTGCTGGAACGCCACGGCATGCACGTCCTGACCGCCAAGGATGGCGTGGATGCCATGGCGCTGCTGGCCGAGCACGCCCCG GACCTGATGCTGCTGGACATCGAGATGCCGCGCATGGACGGCTTCGAAGTGGCCACGCAAGTGCGCAACGACCCGCGCCTGGCGCATTTGCCGATCATCA TGATCACCTCCCGCACCGGCCAGAAACACCGCGACCGTGCCATGGCCATCGGCGTCAACGACTACCTGGGCAAGCCGTACCAGGAATCGGTGCTGCTCGA CAGCATCGCGTACTGGAGCAAAACCCATGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGCATCTTCACTCGCGCACCAGCCCACTCACCGGCCTGTTGTTGCCATTGGCTGACCGGCATCTGGTGTTGCCCAACGTGGCCGTGGCCGAACTGATC GACTACCAGAGCAGCGTATTCGATATGGACACCCCGCCGTGGTTCCTGGGCTGGGTGAGCTGGCGTGAACGGCAAATCCCGTTGCTGAGCTTCGAGTCGG CCTGCGGCCAGAAGACCGTGATTGGCGAGCGAGTGCGCATCGTCGTGCTCAACGCCCTCGGCGGACGGCCGGAGCTGCGTTTCATAGCGCTGCTGGTGCA AGGCATCCCACGCTCCTACAAGCTCGACAGCCAGTTGAGCTACGTCGACGTGCCGCTGTGCGGGTTGGAACAGGCGGCGGTGCAAGTTGGGGAACACGTG GCGAAAGTGCCGGATTTGTTGGCACTGGAGGAGTTGGTGATGGCTGCGGGCCTGATTCAGCCCCACAAACCCTGAGGCATACGAATTCCCAATGTGGGAG
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| Amino Acid Sequence |
>sensor histidine kinase
MGDRHDYVALEWVKGEIAETLKQAHLALNRLVDDPQASDALGQCLACIHQVHGGLQMVEFYGAALLAEEMEQLCAALQDNRVTHRDEAISLLSQALGQLP IYLDRVQGARRDLPLVVLPLINDLRSARGESLLSETSLFSPELPDIAPLSDEALQRLEPADLPNTLRKLRQTLQMALVGLLREQDDATHLGYLAKVFHRL ETLCTGAPLNALWQVASALVEGMRDGRIANSPALRSLFKEADKELKRLLDQGMPGINQPAPPHLLKSLLFYIAKAEHPSGQMQIMKERYSLDDALPDSAM VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASELDSLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQRKPDDATLMDVA GALLYVEATLAGMVGTVEPESREDTHLPTTDLTQIHQIVIKEAHTCLQQAKDMIVDYIDADWNREQLQPLPALLTQVRGALAMIPLSRAASLVEACNGFI REHLLLDQAQPGWEELDHLADVITGLEYYLERLSEDPETPGEPLLDGVERSLAALGYFPDEARVPVLDDVLSPNEAQVMQDLQEWDDPQTVQSLAEVLAS PISAVNPPAKSTPGSLLPPPLDESPVDDELREVFLEETGEVLDVLREYLPRWSAHPDDHGALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLE RSVEPQASVRQLIEDTVQLLPALVAEFAANHQRQRDDVDRLAARAHVLAKGGDEKDEDEQDVAALDPLLLKIFDSEAQGHLASLNRFLDQSADHLPLQAS DELQRALHTLKGSASMAGVLPIAELAGAMDELAREYRAHLIALDLDEVELLLEAEGLLRRGLRQLHSEPLAAIPGAEDLIQRAQALLAERLHAANSAPDK ALRTKRDPQLINNFLAQGMDILLDAESLLQRWQQHPGEGQELSALLDELTTLGEGAHLADLHPVDELCEALLDLYGAVEESSLAVSDEFFQEAQRAHEAL IDMLDELAAGQHVHPQPERVQALRRLLQESLDPSATGLIRSDGSRTLSIRELGHATAEMERDAPVDTSMEDDLAAIFLEEAQDILESAAQALQRWLADPD NGAPLSSLQRDLHTLKGGARMADIRPVSDLAQELENLYEGLVDRRYSYSEELAQLLASSHERLDLLLGQLQQGQPLGDPVALIDAIRRFRQDKPNAIETS AAAQADGAGHDPELLEIFLEEGFDILDSSGAALLRWQEEPSNRQAVETLLRDLHTLKGGARMVEIGPIGDLAHELENLYEGLSAGLLQPTPALFTLLQSS HDRLAQMLDAVRAGHPCPLADRLIAQIQAVNHPQENAAPQAVSAPEPVPTPIVSPPAAPARPDPSAAGDGADMVKVSAELLDDLVNLAGETSIFRGRIEQ QVNDGRVALGEMETTIERMRDQLRRLDTETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLELKETLDRSNHDAEVLLQQQGRIN TELQEGLMRTRMVPFERMLPRLKRIVRQVAQELGKDVEFLVGNADGEMDRNVLERMAAPLEHMLRNAVDHGLEPADVRIAAGKPARGRISLDLSREGGDI IFDIRDDGAGVPLEAVRNKAIKRGLLAPDSDISERDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMVIDSTPGQGVNFRIRLPFTVAVNR ALMVHCHEDQYAIPLNTIESIVRVLPAELDGYYQLDPPTYTYAGQRYELCYLGELLKTGARPKLLGQSQPLPVLLVQCNERHVAVQVDATAGTREIVVKS LGPQFSAVQGLSGATILGDGRVVLILDLLAPIRALPHQVPRRQVPVEGEGESQRPLLVLVVDDSVTVRKVTSRLLERHGMHVLTAKDGVDAMALLAEHAP DLMLLDIEMPRMDGFEVATQVRNDPRLAHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLDSIAYWSKTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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