Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGGATCCGCAACGTCGCTGATACCCCGATCGTGATCCTGACGGCCAAGGAAGATGACGTGGACCATATCCTCGGCCTGGAATCCGGTGCCGACGACTA CGTGATCAAACCCATCAAGCCTGCGGTACTCCTGGCTCGCCTGCGGGCGCTGCAACGTCGGCAAGTGCCAGACATCAACGTGCGCGGTGCCCATGAGTTC GGACGATTGTCCATCGACCGCAGCAGTCGGGAGGTGCGACTGGCCGGTGACCTGGTCGAGCTGACCACCATGGAGTTCGAGCTGCTGTGGCTGCTGGCAA GCGCGGCAGGCAAGATCCTGTCGCGCGATGACATTCTCAACCGCATGCGTGGCATTGCCTTCGACGGTCTCAATCGTGGCGTCGATGTCTATGTCAGCAA GCTGCGGGCCAAGCTCAACGACAATCCCCGGGAGCCGATGCGGATCAAGACTGTCTGGGGCAAGGGTTACCTGTTCAATCCGTTTGGGTGGGAGCTGTAG
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DNA Sequence for Gene |
>AW28_RS14165
ATGCTGCGGTTATTCCTGGGACTTTTCCTGGTCATGACGATTGGCTTGGTGCTGGCGTTGCAAACGGTCGATCGCACCTTCGATGCGCTTCTTGACGGTG AGATGCAGCATTACAACCAAGAGGCGGTGCGTGGTCAGGCCTGGTCGTTGGTCGAGCAACTGCGTGGCCTGGACGATTCGGCCCGGGAGCGACAATTGGA AACCGTGCGGCCTCACTACGGCTTGGACCTGGCCTTGGTCGAGCGCGATCAACTGTCCTTGAGCACCCAGGAGAAAGCCGAGTTGAGCCAGGGGCTGTTG GTAATGCGTGACCAGTACACACAGTTCATCTCGCGCATTGACGACGGTTCGCAGCTACTGAGCATCAAGCTGCCGGCAGAGCCGAGCCTGATGCCGTTCT ATATCACCGTGGCCTACATGATGATCGCGATCATGATCGGTTTCGTGCTGTTTTTCTGGGTGCGACCTCACTGGCGCGACCTGGAGAAGCTGCGCCTGGC GGCCGAGCGCTTTGGTGGCAACGATCTGTCGGTGCGTATTCAGTTGTCCAAGCGTTCGAACATTCGCGACCTGGCCGAACATTTCAATTTGATGGCTGCG CGCATCGAGGGCCTGATCGCCAATCAGCGCGAGCTCACCAATGCGGTTTCCCACGAGCTGCGAACGCCTATTGCACGCTTGTCGTTTGAACTGGATCAAC TCAAGCAGCAGCCCGATCCGAGCCAGAACCGCGAGTTGATTGACGACATGTACGCCGATCTCGGCGAACTGGAAGAAATGGTTTCCGAGTTGCTGACATA TGCCAGCCTGGAGCAGGGCGCCACGGTGATTGTCCGGGAGGACATCCAGGCGCGCGATTGGCTCTACAGCGTGGTGGGCAGTGTGGCGCTGGAGGCGGAA GCCGCCGGGGTGCAGCTGTTGATTGCCGAATGTCCGGTCGGGGTGGTCCGTATCGAGCCACGCTTCATGGCCCGTGCGGTGATCAATTTGCTGCGCAATG CCATTCGCTACGCCGATGAGCGGGTGCAGGTGTCATTGACGCGCGCGGGTGATCATTATGAGGTGCGAGTCAATGACGACGGGCCGGGCGTGCCACTGGA CGGGCGGGAGAAGATTTTTGAGCCGTTCTCGCGCCTGGACGCCAGCCGCGACCGTCGTACCGGAGGTTTTGGCCTGGGGCTGGCGCTGGTGCGACGGGTG TCGCAATCTCATCGTGGGCACGTGGAAGTAACGGACTCGCCCTGGGGCGGGGCATCGTTTCGCATGACCTGGGCGCACCTTGATTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGGGCGCATTCGCGAGGGAGCCTTCTCTTCAGAAGGCATAAACCACCTGCCCAACCAACGACGCTTGCATCCGCCGCTCCACAATCGGACTGCGGGCT GCGTCGCCGGCCAGGTACTGCACGGCCAGCACCGTCGATACGCTCCACTGTTCGTCGAGCGGCAATGACCAAGTCAAATCCGCCCCGCGACTCACCAGCC CGCCATGGGTGTCGTGGGCCCGGAACTGACTGCGCGAAGCCTGGGCGGCGCTGACGCCATACCAGGTACGGACATAGTCGCCGTCGCCGAATTGACTGTT GAGGCTGCCCATGAGCTTGCCATGGCTACCCTCGTAAAACGGCATGCTGAGGCTCAACTTCAGCCGGTTCCAGGCGGAGCCGGTATCACGGTTGTCGTCA TCTTCTTCCAGAGCATGTTCGAAGCTGGCCTCAAGGACGATCGGCCCCATTTGATAGGTCCCATCCAACCCCAGCACCGGCCGGGACTTGATCGAGCCCA
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Amino Acid Sequence |
>ATPase
MLRLFLGLFLVMTIGLVLALQTVDRTFDALLDGEMQHYNQEAVRGQAWSLVEQLRGLDDSARERQLETVRPHYGLDLALVERDQLSLSTQEKAELSQGLL VMRDQYTQFISRIDDGSQLLSIKLPAEPSLMPFYITVAYMMIAIMIGFVLFFWVRPHWRDLEKLRLAAERFGGNDLSVRIQLSKRSNIRDLAEHFNLMAA RIEGLIANQRELTNAVSHELRTPIARLSFELDQLKQQPDPSQNRELIDDMYADLGELEEMVSELLTYASLEQGATVIVREDIQARDWLYSVVGSVALEAE AAGVQLLIAECPVGVVRIEPRFMARAVINLLRNAIRYADERVQVSLTRAGDHYEVRVNDDGPGVPLDGREKIFEPFSRLDASRDRRTGGFGLGLALVRRV SQSHRGHVEVTDSPWGGASFRMTWAHLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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