Pseudomonas brassicacearum PA1G7, AW28_RS05320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain PA1G7 Scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGGCGCGCAGGAGGGTTTCGTGAATCTGGCTGCGCAGTGCATCGGCTTGATCGCCTGCCAGCGTCGCGGTGTGATCGAGCAACCGTTCCGTGTCGCTG ACCAGCGTCTGGAAATCTTCCATCAGGGTTTCTTGAGCAGTCTTTGCCTGGGTTCTGGCCATCAGTGAATCTCCGTAAGTGACGTCTGAAACGTTCGAGT ATGAGCCTTGCTGGAAGGTTCAGTACAAGTGACTGGTACAACTTTTGCTCAGGCTTTTGCCATGTACTGGTGCATCAGCCTGCGCCAGTGCGCTGAAGCT GGGCGAAAGCCCGAAAACCTTAACCCAAATAATCAAAACCCGCGAAGCACCTCCAAGCGGGATTTCGTTTTGACCATTCTTGCGCACCAAAGCGGTTCAC CGGCCTGCGTCTGGCCAATGGGTCGTTTCAACTTGGTGCGTTCGCAAGGCAAACGAACCGGTTTGGTGCTTTTTTCAACTTTTTCAGGTCTGCCAATACC
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| DNA Sequence for Gene |
>AW28_RS05320
ATGGAAAATATGCAAAGTGCCGTGGACGGTCTGGTCCACAGCTCCAACACGCTGTTCATCCTGCTTGGCGCAGTCATGGTCCTGGCCATGCATGCCGGCT TTGCGTTTCTTGAAGTGGGAACGGTCCGGCAAAAGAATCAGGTCAATGCGCTGTCGAAAATCCTCAGCGATTTCGCGGTCTCGACCCTGGCCTATTTCTT TATAGGCTATTGGATTGCCTACGGTGTGACCTTCCTGCAACCGGCGGCGGTGCTCAGCACCGATCATGGCTATAGCCTGGTGAAGTTCTTCTTCCTGCTG ACCTTTGCCGCCGCGATCCCGGCCATCATTTCCGGCGGTATTGCCGAACGTGCCCGGTTCGCACCGCAGTTGTGCGCCACGGTGCTGATCGTGGCGTTTG TCTATCCGTTTTTCGAAGGCATGGTCTGGAACGGCAATTTTGGCTTGCAGGCCTGGCTGCAAGCCCGGTTCGGCGCCAGCTTCCATGACTTCGCCGGCTC CGTGGTGGTGCATGCCATGGGCGGCTGGCTGGCGTTGGCTGCCGTGCTCTTGCTCGGCCCGCGTAACGGCCGCTACCGGGATGGCCGCCTGGTGGCGTTT GCGCCTTCGAGCATTCCTTTCCTGGCCCTGGGTTCGTGGATCCTGATTGTCGGCTGGTTCGGTTTCAACGTGATGAGTGCCCAGACCTTGCCCGGGGTGA GCGGGCTGGTGGCAGTCAATTCGTTGATGGCCATGGTGGGCGGTACCGTGGCGGCCTTGATTGTCGGGCGCAATGACCCAGGCTTCCTGCACAACGGCCC GCTGGCCGGTTTGGTGGCGGTCTGTGCCGGTTCCGACCTGATGCACCCGGTCGGTGCGCTGGTCACGGGGGCCATTGCCGGTGCCTTGTTTGTCTGGTGC TTCACCGCGGCCCAGGGCAAGTGGAAGATCGACGATGTGCTCGGCGTCTGGCCGCTGCATGGGCTGTGCGGGGTCTGGGGCGGCATCGCTTGTGGCGTCT TTGGCCAGAGCGCCCTGGGCGGCCTGGGTGGGGTCAGCCTGGTCAGCCAATTGATCGGCACGGCGCTGGGAATTGTCGTCGCCCTGGCCGGCGGGTTTGC GGTCTATGGCGTGATCAAGGCCGTGCTGGGGCTGCGCCTGACCCAGGAAGAAGAGTATTACGGCGCCGACCTGTCGATTCACAAGATCGGCGCGGTCAGC CAGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGTCGCACTATGGCTCCTTGTCCTGGTTGCCGGGATAAAAGCCGTGGAGTAGGCGATAGCGGTCATGACGAACCTGATCCACATGATGCCGGACCTGCT GCTCGGGCAGGCCGAGCATGATCAGGGCGTGGGAGGCCAGCATCAGGCTCGACTCCAGCAGCTCCGGGACCACTTCGCTGGCCCCGGCAGCCTGCAGCTC GGCCAGTTGGCTGTCGTCACGGGTGCGCACCAGGATCGGTACCTGGTGGTTGACCTGTCGGGCCGCCTTGAGCACGGTGATGGCGATGTCGGTCTTGTCC ACTGCGATCACCAGCAACCTGGCGCGGCTCAAGCCAACGGCCGCAAGCAGGTCTCCTCGTCGCGAATCCCCATAATGCACGCAGTTTTCCCCGACGGTGG CTTCCTGGATGATCACTGGGTCGTCATCCAGGGCGACGAACGCCTGGCCTTCGCGACGCAGGAACCGTCCGATGGATTGACCGACGCGCCCATAGCCGCA
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| Amino Acid Sequence |
>ammonium transporter
MENMQSAVDGLVHSSNTLFILLGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAVSTLAYFFIGYWIAYGVTFLQPAAVLSTDHGYSLVKFFFLL TFAAAIPAIISGGIAERARFAPQLCATVLIVAFVYPFFEGMVWNGNFGLQAWLQARFGASFHDFAGSVVVHAMGGWLALAAVLLLGPRNGRYRDGRLVAF APSSIPFLALGSWILIVGWFGFNVMSAQTLPGVSGLVAVNSLMAMVGGTVAALIVGRNDPGFLHNGPLAGLVAVCAGSDLMHPVGALVTGAIAGALFVWC FTAAQGKWKIDDVLGVWPLHGLCGVWGGIACGVFGQSALGGLGGVSLVSQLIGTALGIVVALAGGFAVYGVIKAVLGLRLTQEEEYYGADLSIHKIGAVS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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