Pseudomonas brassicacearum PP1_210F, P908_RS23110 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum PP1_210F scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAACCCGGCGCCGTTCTGCATGCTCGACGAAGTCGACGCACCACTGGACGACGCCAACGTAGGCCGTTACGCACGGCTGGTGAAGGAGATGTCTGAAAC GGTGCAGTTCATCTACATCACCCACAACAAGATCGCCATGGAAATGGCCGATCAGTTGATGGGGGTGACCATGCATGAGCCGGGCTGTTCGCGGCTGGTG GCGGTGGATGTGGAGGAGGCCATGGCAATGGTGGATGCCTGAAGAACGGTTTGTAGGGCTTCTACTTGGAACGCTGTAGGTATTTTTTACCCTGGGGCCT GTTGTTCAAATCACAGATTGGACACAAGCCTGTGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAGTTTAATGTCAATTTTTCGTATGCGTGGGCA AAACGCCATTCAGAACATAGAGTTGGCGCCACGTTTTAAAGCGGTTTGCAAATAGCTAAGCCCCTTATTTTTCAGCATTTTTATAGAGGCACGGGATTAC
|
|
| DNA Sequence for Gene |
>P908_RS23110
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATCATTGTCATTGCCGGTATTCTTTTCGACGGCTGGCGCCGCATGCGCGGCGGTAAGGGGA AACTGAAGTTTCGCCTGGACCGCAGCCTGTCGAACCTGCCCGATGAGGATGACAGCGCCGAACTGCTAGGCCCGCCCCGGGTGCTGGACACCCACAAGGA GCCGCAGCTGGACGAACACGACTTGCCGTCGATGAGCGCGCCTGCCCGTGAGCCACGGGAGTCGAGTTCCAAGCGCGGCAAGCGCAACAGCGAGCCGTCC CAGGGTGATTTGAACCTGAACCTCGACCTGGATGGTGGCCCGAGTTTCAGCAGTCGCGACAGCGATTTCCCGGACGAGAACAAAACCTCGAGCGCCGACA AAGACCAGGCCCAGGCTGAAGAAGTGCTGGTGATCAGCGTGATCTGCCGCGACCCGGCCGGCTTCAAGGGCCCGGCGTTGCTGCAGAACATCCTGGAAAG CGGCCTGCGTTTCGGCGAGATGGACATTTTCCATCGTCACGAGAGCATGGCCGGCAACGGCGAGGTGCTGTTCTCCATGGCCAACGCCGTCAAGCCTGGC GTGTTCGACCTGGACGACATCGATCATTTCAGCACGCCGGCGGTGAGTTTCTTCCTCGGCCTGCCGGGCCCGCGTCATCCCAAGCAGGCCTTCGACGTGA TGGTGGCCGCGGCTCGCAAGCTGTCCCAGGAGCTCAATGGCGAACTCAAGGATGACCAGCGCAGTGTGCTGACTGCCCAGACCATCGAGCACTATCGCCA GCGCATCGTCGAATTCGAGCGCCGGGCATTGACCCAGAAGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCCAAAGATCGCTGGCCTGCAGGAGCTGACGAGTGCAGCTCCTGCACGCGATCGAAGTATTGAGAATGAGCAGCCTAGGCTGCTCTTTTGCTTTATGAG AGAACACCCATGAACGCCGTTGAAACCCGCATCCAACAGCTGCGCACCGAGCTGGATCAGCACAACTACCGCTACCACGTCCTCGACGAACCGAGCATCC CGGACGCCGAGTACGACCGCTTGTTCCACGAGCTCAAGGCCCTGGAAGAGCAACACCCGGAGCTGGTGACCAGCGATTCCCCGACCCAGCGCGTCGGCAG CGTGGCGCTGTCGGCGTTTAGCCAGGTGCGTCATGAGATCCCGATGCTCAGCCTGGGCAACGCCTTCGACGAAACCACCATGCGCGAATTCGACCGGCGG GTGACCGAAGGCCTCGACCTGCCCATGGGCGATTTGCTGGGCGGTGGCGCGGCGGTTGAATACAGCTGCGAGCCGAAACTCGATGGCCTGGCGGTCAGCC
|
|
| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSLSNLPDEDDSAELLGPPRVLDTHKEPQLDEHDLPSMSAPAREPRESSSKRGKRNSEPS QGDLNLNLDLDGGPSFSSRDSDFPDENKTSSADKDQAQAEEVLVISVICRDPAGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMANAVKPG VFDLDDIDHFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|