Pseudomonas brassicacearum PP1_210F, P908_RS15325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum PP1_210F scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTACTGGCCTGCACCGCGCTGTACGCCGATGGCCGGCGCTCCCTGGATGGGTTCGCGGCGATTGTCCGTGAACAGTTCGGGCTGCCCGTGGAGCTG ACCGCCTACGAAGGTGGCTGGCGTGAAATCCCGCCAGCCAGCCGCAGCCGCTTGCAACCGGGCGGGCGCAACCTGTGCCTGGGCCGCAACGCGGTGACCG GCACCCACGTCTGGGACGAACATGCCGGCGTGCGCCTGACCCTCGGCCCGCTGACCACGGGCCAGGCCAGCGGACTGCTGCCCAACGGCGAAGCCCATGC GCTGCTCGCCAGTCTCTACGCCCTGTACTTCGGCCCCGACCTGGATTGCACCCTGGTGTTGCTGATCCGTGGCGCCGGCCCACTGCAACTGGACCGCCAG GCAGCGCCACGGCTGAACTGGAACGGCGGCCTGCAACGCCAGCCGACCCTCGCCGTGCAACGGATCGAAACCCGCCTTCGTCAGCCGGAGATAGCCTGAA
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| DNA Sequence for Gene |
>P908_RS15325
ATGGAACTGGCCAGCCTGATCGGACGCCTCAACCCGGACAACCGCCGCGCCCTGGAACGGGCCGCGCAACGTTGCATGCAGCGCAGCCATCATTACGTGG AAATCGAACACCTGCTGTTGGAGTTGCTCGACATCGAGGGCGGTGATTTTGCCTGCCTGCTGCCACGATTCGGTCTGGAGCGTGACGCGGTGGCGACGGA AACCAACAAGGCCCTGGACCTGTTCAAATCCGGCAGCACCCGCACACCCGCCCTGTCGGCACAAACCATCGGCCTGCTGGAAGACGCCGTGGTCCAGGCC AGCGTGCTGGGCCTGGACAGCATCCGCTCCGGGCTGTTGCTGCTGGCGCTGCTGGACCGCGATGAGCGCCGCAGCCTGCTGCTCAACAGCGCCTCGTCGT TGCTGCGCATTCCTCGCGACGCCCTGCGCGCCCACCTATTGGAATGGACCGAAAGCTCCCGCGAGCATGCCGGTGGCGTGCGCCCGGCCAAACCCGGCGA GGTGCCACAGAAACAGGACCCGGTGCTGGACCAGTACACCCAGGACCTGACCGCCGACGCCCGGGCAGGGCGCATCGACCCCATCGTCGGCCGCGACGGC GAGATCCGCCAGTGCATCGACATTCTGCTCCGGCGCCGGCAGAACAACCCGATCCTGGTGGGCGCACCAGGCGTCGGCAAGACCGCAGTGGTGGAAGGCC TGGCCCTGCGTATCGCCGCCGGGGATGTGCCGCCATCGTTGCAGGAAGTCACCCTGCGTGTCCTCGACCTGGGCCTGTTGCAGGCCGGTGCCGGTGTCAA AGGTGAATTCGAACAACGCCTCAAAGGCGTGATCGACGCGGTACGCAGTGCCGAAAAACCGATCATCCTGTTCATCGACGAAGCCCATACGCTGATCGGT GCCGGCGGCGCGGAAGGCGGCAGCGACGCGGCCAACCTGCTCAAGCCGGCCCTGGCCCGGGGCGAACTGCGCACCCTGGCCGCCACCACCTGGCTGGAGT ACAAAAAATATTTCGAGAAAGACCCGGCCCTGGCCCGCCGCTTCCAACTGGTGCAGGTCGAAGAACCGGACGAACTTACCGCGGTGGAAATGCTCCGCGG CGTGGCGAGCAAACTGGAACAGCACCACGGCGTGCAGGTGCTGGACGCGGCCATCCACGAGGCGGTGAAGCTGTCCCACCGCTACATCTCCGGGCGACAG TTGCCGGACAAAGCCATCAGCGTGCTCGACACCGCCTGCGCCCGGGTCGCCCTCGGCCAGCACGACGTGCCGCCGCCGTTGGAAAGCCTGCGCCATCGGC AGAACAGCCTCAAGGACGAGGTCGAACGCCTGCGCCGGGAACAGGCCACCGGGCTCGATCACCGCGAGCGCATCACTCTGCTCGAAGACGAATCGACCAG CAATGTGCAGGCCATCCGCGAGCTGGAAACTCGCTGGGGCGAAGAGCGCGAAGCCGTGCGCGAACTGCTCGACACCCGGCGCGAACTGCTTGCCCTGAGC GAACGCGCCGACAGTGAAAAAGCCGACACCGAGATCGATAACCGCATCGACCACCTGGCCGCCGAACTGCTGCGCCTGGAAGCTGGCCTGGATGCCATTC GCCAGGACGATCCGCTGGTGCCCGAACAGGTGGACAGCAAGACCGTCGCCGCCGTGATCGCCGGCTGGACCGGCATCCCGGTGGGCAAGATGCTCGCCGA CGAAGCCCACGCCGTGCGCACCCTCGGCCAGCGCATGGGCCAGCGGGTCATGGGCCAGAGCACCGCGTTGAACACCATCGCCCAACGCCTGCAAGCCTAC CGCGCCGGCCTCACCGACCCACAGAAACCGGTCGGCGTATTCCTGCTGGTGGGCCCCACCGGCGTGGGCAAGACCGAAACCGCCTACGCCCTGGCCGACG CCTTGTACGGAGGTGAACGCAACCTGATCAGCATCAACCTCTCGGAGTACCAGGAAGCCCACACCGTCAGCCAACTCAAAGGCGCCCCACCCGGCTATAT CGGCTACGGCAGCGGCGGCGTGCTCACCGAAGCGGTGCGGCGCAAACCCTATTCGGTAGTGCTGCTGGATGAAATCGAAAAAGCCCACCCGGATGTGCTC GAAGCCTTCTACAACGTCTTCGACAAAGGCCTGATGGAAGATGGCACCGGCCTGGTGGTGGACTTCAAGAACACCGTGATGCTCGCCACCAGCAACGTCG GCGCCGAGCTATTGCTGGATACGCCCGCCGCGCAACTGGGCAGCGACGCCTTCAACGAAGCCTTGCACAAGGTGCTGCTGCAAGCATTCCGCCCGGCGTT TTTGGCGCGCATGACCGTGGTGGCATACCGGCCGCTGGATGAAGCGACACTGGAGGGGATCGTGCTGGCGAAGCTGGAAAAACTGCGCGGGCGCTACAAG GCTGCGACGGGCAAGCAGTTCGAGTTCGATGCCGGAATCGTCAAGGCTGTGTTGGCCAAATGCAGCGCGGCGGGGGCACGGGACGTCGAGAATGTGTTGA TGACGCAAGTGACAGGGAAGTTGGCGGAGTGGGTGTTGGAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATTAGACAAGTCAGAAGGGAGTGAACATGTCCTTAACTCGAGAAGTGGTTGCCGTTATCAATTCAACCGTGAACAGCGCCGATCGAAATTTCGTGGTC GGCTGGAATGAAACCCGCCAGTCCTTAATCGAAAATTGGGATTATTTTCGAACAATCTGGCGCGGCGCTGATATTGCCCGCCCCCAGCAAGAAGACTATG GCGCTGGCTTGGAGGATACCTTCCGCTGTCTGTGCAACAGAGTATTGCCGGTCTATCTGGCCCAGGCGGATCATGTTCTAAGTAGAGAAGAAATACCCAA TAGAATCTTATTTCAGCAAGTCGTTCCGCCCCGCTCACCCGGTCCGCTCAGGCAACGGATAACCATAACCCTGGATGACAACAATGTGATCGAACAGGTC ACAGGGAACTACATCGTTGAGTATCAGATCAATCCGAGCACGGCATTGACCGATATCGGGCGATATGGCGTTGACCCGGGAAGTGGCATCATCAGGGCCA
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| Amino Acid Sequence |
>ATPase
MELASLIGRLNPDNRRALERAAQRCMQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLERDAVATETNKALDLFKSGSTRTPALSAQTIGLLEDAVVQA SVLGLDSIRSGLLLLALLDRDERRSLLLNSASSLLRIPRDALRAHLLEWTESSREHAGGVRPAKPGEVPQKQDPVLDQYTQDLTADARAGRIDPIVGRDG EIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAAGDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILFIDEAHTLIG AGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDELTAVEMLRGVASKLEQHHGVQVLDAAIHEAVKLSHRYISGRQ LPDKAISVLDTACARVALGQHDVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLEDESTSNVQAIRELETRWGEEREAVRELLDTRRELLALS ERADSEKADTEIDNRIDHLAAELLRLEAGLDAIRQDDPLVPEQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGQRVMGQSTALNTIAQRLQAY RAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKGAPPGYIGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVL EAFYNVFDKGLMEDGTGLVVDFKNTVMLATSNVGAELLLDTPAAQLGSDAFNEALHKVLLQAFRPAFLARMTVVAYRPLDEATLEGIVLAKLEKLRGRYK AATGKQFEFDAGIVKAVLAKCSAAGARDVENVLMTQVTGKLAEWVLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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