Pseudomonas brassicacearum PP1_210F, P908_RS09215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum PP1_210F scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTGGTACTTCCTGGTGCCGGACCTGCTGCCCGCCGATATGCAGGAGTGGTACAAGCAGGACCTGAACCCGACCACCTCGGCCTACCTGAGCGTCGTGG TGTGCCTGGGCCTGTTCACCGCCGCCCGGGTTTGCGAACAGGTGCGCACCGGTATCCAGGCGCTGCCGCGCGGCCAGGAATCCGCCGCCCGCGCCATGGG CTTCAAGCTGCCACAGATCTACTGGAACGTGCTGCTGCCCCAGGCCTACCGGATCATCATTCCGCCGCTTACCTCGGAATTCCTCAACGTCTTCAAGAAC TCCTCCGTGGCCTCGCTGATCGGCCTGATGGAGTTGCTCGCGCAGACCAAGCAGACCGCCGAGTTCTCCGCCAACCTGTTCGAAGCCTTCACCCTGGCCA CGCTGATCTATTTCACCCTGAACATGAGCCTGATGCTGCTCATGCGCATGGTCGAGAAGAAAGTCGCGGTGCCCGGCCTGATCTCCGTGGGGGGTAAATA
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| DNA Sequence for Gene |
>P908_RS09215
ATGGAACTCGACTTCACTGGCATCATCCCGGCCATTCCCGGTTTGTGGAACGGCATGGTAATGACCCTCAAGCTGATGGCCTTGGGCGTGGTCGGCGGGA TCATCCTCGGCACGATCCTGGCGCTGATGCGCCTGTCCCATAACAAGCTGGTCTCCAATCTCGCTGGCGCCTATGTCAACTATTTCCGCTCGATCCCGCT GCTGCTGGTGATCACCTGGTTCTACCTGGCGGTGCCGTTCGTGCTGCGCTGGATCACCGGCGAAGACACGCCGATCGGGGCATTCGGTTCTTGCATCGTG GCGTTCATGATGTTCGAAGCGGCGTACTTCTGCGAAATCGTCCGGGCCGGCGTGCAGTCGATTCCCAAGGGCCAGATGGGCGCCGCCCAGGCACTGGGCA TGAATTACGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCGTTTCGCAAGATGACCCCGCTGCTGTTGCAACAAAGCATCATCCTGTTTCAGGACAC CTCGCTGGTCTACACGGTTGGCCTGGTGGACTTCCTCAATGCTTCGCGGGCCAGTGGTGACATCATCGGCCGCTCCAATGAGTTCCTGATCATCGCAGGT CTCGTGTACTTCACCGTCAGCTTTGCCGCCTCGCAGCTGGTCAAGCGTCTGCAAAAAAGGTTCGCCGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTCTATCAAAAACATCAACAAGTGGTATGGGGACTTCCAGGTACTGACCAATTGCAGCACCGAGGTCAGCAAGGGTGAGGTGGTGGTGGTGTGCGGGCC GTCGGGTTCGGGCAAGTCCACGCTGATCAAATGCGTGAACGCCCTGGAACCGTTCCAGAAAGGCGACATCGTGGTCGATGGCACGTCCATCGCCGACCCG AAGACCAACCTGCCGAAACTGCGATCGCGCGTGGGCATGGTGTTCCAGCATTTCGAACTGTTCCCGCACCTGACCATCACCGAAAACCTGACGATCGCGC AGATCAAGGTGCTGGGCCGCAGCAAGGAAGAAGCCACCAAGAAAGGCCTGCAACTGCTTGAGCGGGTCGGCCTCTCGGCCCACGCCCACAAGCACCCGGG CCAGCTCTCCGGCGGCCAGCAGCAACGTGTGGCGATTGCCCGTGCCCTGGCGATGGACCCGGTGGTGATGCTGTTCGACGAACCGACCTCGGCCCTTGAC
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| Amino Acid Sequence |
>glutamate/aspartate transporter permease GltK
MELDFTGIIPAIPGLWNGMVMTLKLMALGVVGGIILGTILALMRLSHNKLVSNLAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFGSCIV AFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMNYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRASGDIIGRSNEFLIIAG LVYFTVSFAASQLVKRLQKRFAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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