Pseudomonas brassicacearum PP1_210F, P908_RS09200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum PP1_210F scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCGCTCCTTTGCCCGCCGTGGCGACGACCAGGGCCAGGCCAGCCTCGGCAAAGGCGTCGAGGCTGCGCTGCAACTGCTGGGCGCCCGCCTTGAAAGCT TGAACATCCAGATTCATTCAAGCTTCGACGATGTCCAGGTGCACATTGACCAGACGCGCCTGGAGCAGATCCTGGTGAACCTGATCGGCAATGCCGTGGA CGCCATGCAGACACAACCCGAACCGCAGCTGTGGCTCGAAGGCCAGGCCGGCGATGGCAAATATCGCCTGCGCGTGCGGGATAACGGCCATGGCATTGAC CCGCAAGCACGCAAGCATCTGTTCGAACCCTTCTTCACCACCAAACCCGGCGAACAAGGCCTGGGCCTGGGCCTGACGCTTTCCGCCAGCCTGGCCGCCG CCACGGGTGGATACCTGGGTGTCGAGCATCCGGTCGAGGGCAGTGGAACCACGTTTGTCCTCAGTTTACCGTTGGTAAGCCTTTTACCTGCCGAGCCGCT
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| DNA Sequence for Gene |
>P908_RS09200
ATGAACAACGACCTGAGCGTACTGATCGTCGAAGACGACCCCCATGTCCTGCTGGGCTGCCAGCAGGCGCTGACCCTGGAAGACATTCCCTGCATCGGCG TGGGCAGCGCCGAAGAGGCCCTGGAGCGCGTCGACGATAACTTTGCCGGCATCGTCATCAGCGACATTCGCCTGCCGGGCATCGACGGCCTGGAACTGCT GACCCGCCTCAAGGCACGGGACCGCAGCTTGCCGGTGGTGCTGATCACTGGCCACGGCGACATCTCCATGGCCGTCGGCGCCATGCAAAAAGGCGCCTAT GACTTCATGGAGAAACCCTTCTCCCCTGAACGCCTGGTGGACGTCGCCCGCCGTGCCCTGGAGCAGCGCAGCCTCGCCCGGGAAGTGTCATCGCTGCGTC GGCAATTGGCCGAACGCGATTCCCTGGAAGGCCGGATCATTGGCCGCTCGCCCGCCATGCAGCACCTGCGCGCGCTGATCGCCAACGTCGCCGATACCTC GGCCAACGTGCTGATCGAAGGAGAAACCGGCACCGGCAAGGAACTGGTCGCTCGCTGCCTGCACGATTTCAGCCGACGCCACGACAAGCAGTTCGTCGCG CTGAACTGCGGCGGCCTGCCGGAGAACCTGTTCGAAAGCGAGATTTTCGGCCACGAGGCCAATGCCTTTACCGGAGCCGGCAAACGGCGGATCGGCAAGA TCGAGCACGCCGACGGTGGCACGCTGTTTCTCGATGAAGTGGAAAGCATGCCCCTGCCCTTGCAGATCAAGTTGCTGCGCGTGTTGCAGGAACGCACCCT CGAGCGCCTGGGTTCGAACCAGAGCGTGGCCGTGGATTGCCGGGTGATCGCCGCCACCAAGTCCGACCTGGACGAAATGGGCCGGACCGGGCAGTTCCGC AGCGACCTGTATTACCGACTCAACGTGGTGACCCTGGAACTGCCGCCACTGCGCGAGCGGCGCGAAGACATCCTGCAACTGTTCAAGCACTTTCTCCAGC AGTCGTCCCTGCGCTTCGATCGCACGGTACCGGAGCTGGACAACCAGACCCTGTCGAACCTGATGAGCCACGACTGGCCGGGCAACGTACGCGAACTGCG CAACGTCGCCGAGCGTTACGCCCTTGGCCTGCCGGCGTTCAAGCGCTCCGGTGCCAGCGGCGGCAACCAGGGCCTGGCCTTCGCCGAAGCAGTCGAAGCC TTCGAGCGCAACCTGCTGGTGGACGCCCTGCAACGCAGCGGTGGCAACCTGACCCAGGCCAGCCTGGAACTGGGCATGGCCAAGACCACGCTGTTCGACA AAGTCAAAAAATATGGCTTGAGCCATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAACTGGGCGGGAAACCTGTGGATCTGATTTTCAAGGCGGCGCTCGGTGCAGCCGTGGTGGTCATCCTGGCGATGCTGGCCAAGACCAAGAACTATTAC ATCGCCGGGCTGGTGCCGCTGTTCCCGACCTTCGCCCTGATTGCCCATTACATCGTCGGCAAGGGCCGCTCGGTGGACGACCTGAAGACCACCATCGTGT TTGGGATGTGGTCGATCATTCCGTACTTCGTCTACTTGGCGACCCTTTACGTGATGGTCGACCGCATGCGCCTGGAGGCGTCCCTGGCCGTGGCGGCGGT GGCGTGGTTGATGGCGGCGACGGTGCTGGTCAGCGTCTGGGTGCGGGTTCACGGCTGATCCCTGTAGGAGCTGTCGAGCGAAGCGAGGCTGCGATCTTTT GATCTTTCGCTAGAGACTCAAGTGTCCAAGGAAAGATCGCAGCCTCGCGTTGCTCGACAGCTCCTACACAAACCAGTGATCAGTAGCCGACGGTAAACCG
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MNNDLSVLIVEDDPHVLLGCQQALTLEDIPCIGVGSAEEALERVDDNFAGIVISDIRLPGIDGLELLTRLKARDRSLPVVLITGHGDISMAVGAMQKGAY DFMEKPFSPERLVDVARRALEQRSLAREVSSLRRQLAERDSLEGRIIGRSPAMQHLRALIANVADTSANVLIEGETGTGKELVARCLHDFSRRHDKQFVA LNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHADGGTLFLDEVESMPLPLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLDEMGRTGQFR SDLYYRLNVVTLELPPLRERREDILQLFKHFLQQSSLRFDRTVPELDNQTLSNLMSHDWPGNVRELRNVAERYALGLPAFKRSGASGGNQGLAFAEAVEA FERNLLVDALQRSGGNLTQASLELGMAKTTLFDKVKKYGLSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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