Pseudomonas brassicacearum PP1_210F, P908_RS06385
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum PP1_210F scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCGCAACCTGTGCGAGCGCTACAAGACCCAGTTGATCATCAACGACGACGCAGAATTGGCCGCACGCCTGGGCGTCGGTGTGCACCTGGGCCAGACCG ATGGCCCGTTGGCGCCAGTGCGGGCACTGCTCGGGCACAAGGCGATCGTCGGTGCCACCTGCCACGCCAGCCTGGCACTGGCCGAACAGGCCGCCAGCGA AGGCGCCAGTTATGTCGCGTTCGGGCGTTTCTTCAACTCAAACACCAAGCCCGGCGCCCCCAGCGCAAACCTTGAACTGCTCGAACAGGCGCACCTCAAA CTGCATGTTCCGGTGTGCGCCATTGGCGGCATCACCCTGGACAACGCCGCCCCGCTAGTGGCCCACGGGGTCGACCTGCTGGCGGTGGTCCACGGCCTGT TCGGCGCCGACAGCACCGCTGAAGTGACGCGCCGCGCCCGCGCCTTCAACGAGCTGCTGCAGATCAAATAGTCCATTTTTCCGTTTTCGAGAGCCCAACC
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| DNA Sequence for Gene |
>P908_RS06385
ATGTCCCGTTCCGAAACCCTGTTTGCCGATGCCCAGAAACACATCCCCGGCGGCGTGAACTCGCCCGTTCGTGCGTTCAAGAGCGTCGGCGGCACCCCGC TGTTCTTCAAGCACGCCGAAGGCGCGTACGTCACCGACGAAGACGACAAACGCTATGTGGATTACGTCGGTTCCTGGGGCCCGATGATCCTCGGCCACAG CCATCCGGACGTGCTGGATGCGGTGCGCAAGCAACTGGTACACGGCCTGTCCTACGGCGCTCCGACCGCGATGGAAACCGAGATGGCCGACCTGGTCTGC TCGATCGTGCCGTCGATGGAAATGGTGCGCATGGTCAGCTCCGGCACCGAAGCGACCATGAGCGCGATCCGCCTGGCGCGGGGCTTCACCGGTCGCGACA GCATCATCAAGTTCGAAGGCTGCTACCACGGCCACTCCGACAGCCTGCTGGTCAAGGCCGGCTCCGGCGCACTGACCCAGGGCGTGCCGAGCTCGGCCGG GGTACCGGCAGCGTTCGCCAAACACACCCTGACCCTGCCGTTCAACGACCTTGAAGAAGTCGAGAAGATGCTCGGCGAAGTCGGCCAGGAAGTGGCGTGC ATCATTGTCGAGCCAGTGGCCGGCAACATGAACTGCGTACCGCCGGCACCGGGTTTCCTCGAAGGCCTGCGCAGCCTCTGCGACCAGCATGGCGTGGTGT TGATTTTCGATGAAGTGATGACCGGTTTCCGTGTAGCCCTCGGCGGCGCCCAGGCCCATTACGGCGTCACGCCGGACCTGAGCACCTTCGGCAAGATCAT CGGTGGCGGCATGCCGGTGGGCTGCTTCGGCGGCAAGCGCAAGATCATGGAATGCATCGCGCCGCTGGGCCCGGTCTACCAGGCAGGCACCTTGTCGGGC AACCCGCTGGCCATGGCCGCCGGCCTGACCACACTGCGCCTGATCAGCCGCCCGGGCTTCCACGCCGAACTGACCGACTACACCACCCGCCTGCTCGACG GCTTGCAGGTTCGTGCCGACGCGGCAGGCATTCCGTTCGTGACCACCCAGGCCGGCGGCATGTTCGGCCTGTATTTCAGTGGCGCCGATGACATCGTCAC CTTCGAAGACGTGATGGCCAGCGACGCCGACCGCTTCAAGCGCTTCTTCCACCTGATGCTCGACGGCGGTGTGTATCTGGCGCCGAGCGCATTCGAAGCC GGCTTCACTTCCATCGCCCATGGCGAGACCGAGCTGAAGATCACCCTCGATGCGGCCGAACGGGCCTTTGCTGCGCTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTGTGGATAACTGACGCTGGCTGAAGCTGGCGTCAGTGATTGCCGACAACCTCCCGCCTTTTTCCTACGTATTTATGCCCGAAGCAGCTATTAGCATT CCCTCGCAGCAGAAAAACGAGTAAAGACTTTGTAAGGATGGCCCTGCTTATTTCATAATGCGCGCTTATTGGATCCCCCGGAGGGTCCGCGCGCCCCTCA GAGGTAAGTCGATTCCCATGAACCGCACCGGCCGCACCCTTGCCTTGGGCTGCCTGTTGCTCCTTCAGCCCCTGCTCGCGAATGCACAGGCAGGCGGTAA CTCGTTGTTGATCCCGGCGCTGGGCCGTTGCACGCTCAATACCCAGCCACAAGATCTCGCACCGGCACTCGACGCCTGTCAAAAAGCGGCGGACGCAGGT GATGCACAAGCGCAATACGAGTTGGGCGAGTTCTACTACGAAGGCAAGGCTGCGCCGCGCGATCTCAAAAAAGCCCTCGACTACTTCGAAAAAGCCTCGC
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFADAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRKQLVHGLSYGAPTAMETEMADLVC SIVPSMEMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTQGVPSSAGVPAAFAKHTLTLPFNDLEEVEKMLGEVGQEVAC IIVEPVAGNMNCVPPAPGFLEGLRSLCDQHGVVLIFDEVMTGFRVALGGAQAHYGVTPDLSTFGKIIGGGMPVGCFGGKRKIMECIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQVRADAAGIPFVTTQAGGMFGLYFSGADDIVTFEDVMASDADRFKRFFHLMLDGGVYLAPSAFEA GFTSIAHGETELKITLDAAERAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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