Pseudomonas brassicacearum PP1_210F, P908_RS02575 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum PP1_210F scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCTTCGAGCAGACCTTGAGCGAGCTGGTTGAGCTTGAGGGCCTGACGCTCAGCTATTACCGAGGCTGGGACAAGGACCGGGAACTGAGCACCGTGTTGG CTGGCTCGCTGCAGCGGGACCAGCAGATGGGCCATACCCAGGCCGGACCACAACGTGCTGACTTGCGTCTCAGATTGGGCGCACATAACGCCGCGGACAT CTTGTCCCGGGGGCAGCAGAAGTTGGTGGTGTGTGCCTTGCGCATAGCCCAGGGGCATCTGGTCAGCCAGGCCCGCCGTGGTCAGTGTATTTATCTGGTG GATGACTTGCCGTCCGAGCTGGACGAAGCCCACCGCCGCGCGCTATGCCGCTTGCTGGAAGACTTACGCTGCCAGGTGTTCATCACCTGTGTAGACCACG AATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTCTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGCA
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| DNA Sequence for Gene |
>P908_RS02575
|gyrB
TTGAGCGAAGAAAATACGTACGACTCAACGAGCATTAAAGTGCTGAAAGGCCTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGTGACACCGACG ATGGTAGCGGCCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCCATCGACGAAGCCCTCGCCGGCCATTGCGACGACATCAGCATCATCATCCACCC GGATGAGTCCATCACCGTTCGCGACAACGGCCGTGGCATCCCGGTAGACGTGCATAAAGAGGAAGGCGTTTCCGCCGCCGAGGTCATCATGACCGTCCTC CACGCAGGCGGTAAGTTCGACGACAACTCCTACAAGGTATCCGGCGGTCTGCACGGCGTAGGTGTATCGGTAGTGAACGCGCTGTCCGAACAACTGGTCC TGACCGTTCGCCGCAGCGGCAAGATCTGGGAGCAGACCTACATCCACGGCGTGCCCCAGGCACCGATGGCGATCGTTGGCGACAGCGAAAGCACAGGCAC CCAGATCCACTTCAAGGCTTCGAGCGAAACCTTCAAGAACATCCACTTCAGCTGGGACATCCTGGCCAAGCGGATTCGTGAACTGTCCTTCCTCAACTCC GGTGTCGGCATCGTCCTCAAGGACGAGCGCAGCGGCAAGGAAGAGCTGTTCAAGTACGAAGGCGGCCTGCGTGCGTTCGTTGAGTACCTGAACACCAACA AGACCCCGGTCAACCAGGTGTTCCATTTCAACGTCCAGCGTGAAGACGGCATCGGCGTGGAAATCGCCCTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATCCCGCAGCGCGACGGCGGCACCCACCTGGTGGGCTTCCGTTCGGCGCTGACCCGCAACTTGAACAACTACATCGAACAG GAAGGCCTGGCGAAGAAGCATAAAGTCGCCACCACCGGTGACGATGCCCGTGAAGGCCTGACCGCGATTATCTCGGTGAAGGTGCCGGATCCGAAGTTCA GCTCCCAGACCAAGGACAAGCTGGTGTCTTCCGAAGTGAAGACCGCAGTTGAACAGGAGATGGGCAAGTACTTCTCCGACTTCCTGCTGGAAAACCCGAA CGAAGCCAAGCTGGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCGGCGCGCAAGGCCCGTGAGATGACCCGCCGCAAAGGCGCGCTGGAC ATCGCCGGCTTGCCGGGCAAACTGGCCGACTGCCAGGAAAAGGACCCTGCCCTGTCCGAGCTGTATCTGGTGGAAGGTGACTCTGCTGGCGGTTCCGCCA AGCAGGGTCGCAACCGCCGCACCCAGGCCATCCTGCCGCTCAAGGGCAAGATCCTGAACGTCGAGAAGGCGCGCTTCGACAAGATGATTTCCTCCCAGGA AGTCGGCACCTTGATCACGGCGTTGGGCTGCGGTATTGGCCGCGAAGAGTACAACATCGACAAGCTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATCCGTACGCTGCTGCTGACATTCTTCTTCCGTCAGTTGCCGGAGTTGATCGAGCGCGGCTACATCTACATCGCCCAGCCGC CGCTGTACAAGGTCAAGAAAGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCCCTGGAAGACGCGAGCCT GCACCTGAACGAAGATGCCCCAGGCATTTCCGGTGAAGCCCTTGAGCGCCTGGTGAATGACTTCCGCCTGGTGATGAAGACCCTCAAGCGTCTGTCGCGC CTGTACCCACAGGAACTGACCGAGCACTTCATCTACCTGCCAGCCGTGAGCCTGGAGCAACTGTCCGATCACGCAGCGATGCAGGATTGGCTGGCCCAGT ACGAAGTGCGCTTGCGCACTGTCGAGAAATCCGGCCTGGTCTACAAAGCCAGCCTGCGTGAAGACCGTGAACGTAACGTCTGGCTGCCGGAGGTCGAACT GATCTCCCACGGCCTGTCGAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTCGTATCCCTCGGCGCGCAACTGAGCACG CTGCTGGACGAAGGTGCGTACATCCAACGTGGTGAACGCAAGAAGGCCGTGACCGAGTTCAAGGAAGCCCTTGAGTGGCTGATGGCCGAAAGCACCAAGC GCCACACCATCCAGCGATACAAAGGTCTTGGCGAGATGAACCCGGATCAGCTGTGGGAAACCACCATGGATCCAGGCTCGCGCCGGATGCTGAAAGTCAC CATCGAAGACGCCATTGGCGCGGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAGCCTCGTCGTGACTTCATCGAGAGCAATGCGTTGGCGGTA TCCAACCTGGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCTTCAGCAGCACCGCTCCAAAAAAAAGCCAACGCTTATGCGTTGGCTTTTTTTTACGTTTGAAAAACGTGCACCCTTTTCAGGCCTGTGGATAAAAA ACGGGGTAACTCGGTAACACCTTGGCACAAAGCCTTCATGCTCAATAGGTTAGGAATTGGGTGAGAGCCCCGGATAACGGGGCCTCAGATTTTCTGGCGC AGAACTTGCGTGTTAAATAAATTACACATCGTTTCTTTAAATTGACAGGGGAACGGTGGGTACGAGGTGACACGAATAAATCCAACACCAAGGGTAGTCT CAATGAGCGGTACGCAAACTTCCAATCATCTGGAGCAAGGGCTCAAACCCCGGCATGTGACGATGCTATCCATCGCCGGCGTCATCGGCGCTGGCCTTTT CGTTGGCTCCGGCCACGCTATCGCAGCGGCCGGTCCAGCCGTGCTGCTGGCTTACGCTGCCGCGGGTGCCCTGGTGGTACTGGTGATGCGGATGCTGGGT
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEQLVLTVRRSGKIWEQTYIHGVPQAPMAIVGDSESTGTQIHFKASSETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNQVFHFNVQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNEDAPGISGEALERLVNDFRLVMKTLKRLSR LYPQELTEHFIYLPAVSLEQLSDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVSLGAQLST LLDEGAYIQRGERKKAVTEFKEALEWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPGSRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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