Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCAAGGCCTGTCCGGGGCGACCATCCTGGGGGACGGCCGGGTGGTATTGATCCTCGACCTGCTGGCGCCGATCCGCGCCATGCCCAGCCACGCGCCGCGC CGCCCGACGACCGAAGGCGAGGGTGAACACCAGCGGCCGTTGCTGGTGCTGGTGGTGGACGATTCGGTGACAGTGCGCAAAGTCACCAGCCGCCTGTTGG AGCGCCATGGCATGCACGTCCTCACCGCCAAGGACGGCGTGGATGCCATGGCGCTGCTGGCCGAACACGCCCCGGACCTGATGCTGCTGGACATCGAAAT GCCGCGCATGGACGGCTTCGAAGTGGCCACGCAAGTGCGCAACGACCCGCGCCTGGCGCACCTGCCGATCATCATGATCACTTCCCGCACCGGCCAGAAA CACCGCGACCGGGCCATGGCCATCGGCGTCAATGATTACCTGGGCAAGCCGTACCAGGAATCGGTGCTGCTCGACAGCATCGCCCACTGGAGCAAGACCC
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DNA Sequence for Gene |
>CD58_RS26830
ATGCATGAACATCGCACCCACCACCTCACCGGGTTGCTGCTGCCCCTGGCTGACCGGCACCTGGTGCTGCCCAACGTGGCCGTGGCCGAACTGATCGACT ATCAGAGCAGCGCCTTCGACATGGACACCCCACCGTGGTTTCTCGGCTGGGTGAGCTGGCGCGAACGGCAAATCCCGCTGCTGAGCTTCGAATCGGCCTG CGGTCAGAAAACCGTGATCGGCGAGCGAGTGCGCATCGTCGTCCTCAACGCCCTGGGCGGACGGCCGGAGCTGAGGTTCATTGCGCTGTTGGTGCAGGGC ATCCCGCGCTCCTACAAGCTCGACACCCAACTGAGCTACGTCGACGTGCCGCTGTGTGGGTTGGAACAGGCGGCGGTGCAGGTGGGGGAACATGTGGCGA AAGTGCCGGATTTGTTGGCGTTGGAGGAGTTGGTGGTGGCCGCGGGGTTGGTTCAGCGGCACAAATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACATACGAAGTTCCAATGTAGGGTGAGCTTGCTCGCGAGGCGGCCTGATAGCCGTTGACCGGGTGCATATCCATTTCTGCGGTAACGGCCACTTAGGGT TCCGCCCTGACGGCGGCTCACTTTTGAGAAGCCTGCGCGGCCCGGCGAAAAGTAAGCAAAACGCTTTATGCCCCACCACTCGGTGCCTCGCTAGGGCTCG GCATGCCCTCACTCCGGCATTGCTCCGTGGGCCCGCCGCGAAGGGCCATCCATGGCCCAGCGCGGCTATCCCGGCATCCATGCCGGGATGCCCACTACGC AATACCTGCATTCGGCCAGCGTGGTTAACGGGGCGCCGAGATCAACGTCCGGCGCGAGGCGGCCTAATAGCCGACCTGGCTCTTGCGGGCGGTGTTTACC AATCAGACCTGTTTGGGCTGGATCTGTGGGAGCAAAGCTTGCTCGCGAGGCGGCCTTATAGCCGACCTGTTTCGCCCGGGTGTACTCAATTCCAATGTGG
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Amino Acid Sequence |
>chemotaxis protein
MHEHRTHHLTGLLLPLADRHLVLPNVAVAELIDYQSSAFDMDTPPWFLGWVSWRERQIPLLSFESACGQKTVIGERVRIVVLNALGGRPELRFIALLVQG IPRSYKLDTQLSYVDVPLCGLEQAAVQVGEHVAKVPDLLALEELVVAAGLVQRHKS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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