Pseudomonas brassicacearum DF41, CD58_RS26040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGTACGTCTGTACTAATACACAGACGTCCGTAGCAAGCTTCTGCCAAGCCCGGCCCTCAAGCCGGGCTTATGGCATTTGCGGAATAACGCTTGATGCT TCACCGTCAAAGTCGCAGATGCGACCACGACAACCTGCTTCACCCACGTCAGACCTGGCTCTTTTGCCAGCGGTGCACGTCTCTTCTGACGAGCCTACCA AGGCTACTGACGAGCACACCCCTGATTCCTCTAACGACGATCAGCCCAAGGCACCTGCTTGCGTGCCCGCTTCATTGAGCTATCCGAGGCCTGACCGGCC GTTACCGGACTCAGCGCAACACATTCAAACAGTCGAATACTGATAGTTATTAACGTCAGTGGATTATCGGCAGATACACTTCCCGACAGCGATAATGCAG ACGACCCGGTCGAGCCACCGATTCAGCGTGCCTCAAACCCAGACCCGGTTACGCCTGCCGATTTCGGGTCCATATTTCGCGCAGTGATGATGAGAACGCC
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| DNA Sequence for Gene |
>CD58_RS26040
ATGGCCGGGCTGATTCCCCAGAGCTTTATTGACGACCTCCTGAACCGCACCGACATCGTCGACGTGGTCAGCTCTCGCCTGCAAATGAAGAAAGCGGGCA AGAACTACACGGCCTGCTGTCCGTTTCACAAAGAAAAAACCCCCTCCTTCAGCGTCAGCCCCGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCTGG CGGTAACGCCCTCGGCTTCATCATGGACCACGACAACCTGGACTTCCCCCAGGCCGTCGAAGAACTGGCCAAAGCCGCCGGCATGGAAATTCCCCGCGAG GAGAGCGGTCGACAGCACAAACCGCGTCAACCGACCGACTCGCCGCTCTATCCGCTGTTGACTGCGGCCGCCGATTTTTATCGCCAAGCCCTCAAAAGCC ATCCGTCACGCAAGGCGGCGGTCGATTACCTCAAGGGTCGCGGCCTGACCGGCGAAATCGCCCGGGACTTTGGACTCGGCTTCGCTCCGCCCGGCTGGGA CAATCTCTATAGGCACCTGAGCAGTGACACGCTGCAGCAACGCGCCATGATCGATGCTGGCCTGCTGATCGAGAATGCCGAAACCGGCAAGCGCTACGAC CGCTTTCGTGACCGGGTGATGTTCCCGATCCGCGACTCGCGCGGGCGGATCATTGCTTTCGGTGGCCGAGTGCTGGGCGACGACAAGCCCAAATACCTGA ACTCCCCGGAAACCCCGGTTTTCCATAAGGGCCAGGAGCTCTACGGCCTGTACGAAGCACGCAAGAACAACCGCAACCTCGACGAGATCATTGTCGTCGA AGGCTACATGGACGTGATTGCCCTGGCGCAGCAAGGCTTGCGCAATGCCGTCGCAACCCTGGGCACGGCCACCAGCGAAGAGCACATGAAACGCCTGTTT CGCGTCGTGCCCAACGTATTGTTTTGCTTCGACGGCGACCAGGCCGGTCGCAACGCCGCCTGGCGCGCACTGGAAGCCACCTTGCCGTGCCTGCAGGACG GCCGTCGGGCACGCTTTCTATTCCTGCCCGAGGGCGAGGACCCGGACACCCTGGTGCGCTCCGAAGGCACCGATGCGTTCCGTGCGCGAATCAACCAGCA CGCGCAACCATTGGCCGATTATTTTTTCCAGCAATTGACCGAAGAGGCCGACCCACGCTCTCTCGAGGGCAAGGCGCATATGGCCACCCTCGCGGCACCG CTGATCGACAAGGTGCCCGGCGCCAATCTGCGCACACTGATGCGCCAGCGCCTGACCGAAATCACCGGCCTCAACAGCGAAGCGGTCAATCAGCTGGTCC ATAGCGCCCCCCAGGAAGCGCCACCGGCTTATGACCCGGGCATCGATTACGACGCGATGCCGGACTTCGCCGACTATCATCAACCTCAGCAGGATTACGC GCCGCAACAGGAATGGACACCGAAAAAACCCGGTAGCGGCGGCAAGAAATGGGACAAAAAACCCTGGGACAAGAATGGCAAGCGCGGCGATCGCGACGCG CCACGTGCCCCGCGCGTGCCGGCCGCCGTCGAACCACCGACACTGGCCGCTCTGCGCACCTTGCTGCACCACCCGCAGCTGGCTGAGAAAGTCGAGGACG CAGGACACTTCGCCGCCGAGGACCACAGCAATACGCAATTGCTGGTCGCACTCCTTGAAGCCGTGCAGAAGAACCCCAAGCTAAACTCTTTCCAGTTGAT TGCACGGTGGCACGGCACTGAGCAGGGACGCCTGTTGAAGGCCCTGGCCGAGAAGGAATGGCTGATTAAAGGAGACAACCTTGAACAACAGTTTTTCGAC ACCATTACTAGCTTGTCCGCCCGCCAACGCGAGCGAAATCTGGAACAACTTCTGCGAAAAGCTCGCCAGAGCGAGTTGACCAGCGAAGAGAAAAACCAAT TGCGCGACTTACTCAGCCGCAATGTTTGCGCATCAAACCCGACCTCAACTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCACAGCTCAGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATCCTATTGGGTCGTGAGCAGGGTTACCTGACTTACGCGGAGGTCAACGACCACCTGCCGGAGGATATTTCAGATCCGGAACAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGGTTGCTCCAGATAAGGATGCCCTTATGCTGGCCGACGCCGATACCGACGAGGCGGC CGCTGAAGAAGCGGCTGCAGCGTTGGCAGCGGTCGAGACCGACATTGGTCGCACCACCGACCCCGTGCGCATGTATATGCGTGAAATGGGTACGGTAGAG CTCCTCACACGTGAAGGCGAAATCGAAATCGCCAAGCGTATTGAAGAAGGCATCCGTGAAGTGATGGGCGCAATCGCGCACTTCCCTGGCACGGTTGACC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPRE ESGRQHKPRQPTDSPLYPLLTAAADFYRQALKSHPSRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYRHLSSDTLQQRAMIDAGLLIENAETGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAP LIDKVPGANLRTLMRQRLTEITGLNSEAVNQLVHSAPQEAPPAYDPGIDYDAMPDFADYHQPQQDYAPQQEWTPKKPGSGGKKWDKKPWDKNGKRGDRDA PRAPRVPAAVEPPTLAALRTLLHHPQLAEKVEDAGHFAAEDHSNTQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIKGDNLEQQFFD TITSLSARQRERNLEQLLRKARQSELTSEEKNQLRDLLSRNVCASNPTSTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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