Pseudomonas brassicacearum DF41, CD58_RS25920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas brassicacearum strain DF41, complete genome. [Details]
DNA Sequence Upstream of Gene
CAGATCGCTCCACCGCGCACGCTCTATGAAGAGCCGAAAAACACCTTCGTCGCCAACTTCATCGGCGAGAACAACCGCCTCAATGGCCGCCTGCACAGTC ACACCGGCGACCGCTGCCTGGTGGAGCTGGGGCGCGGTGAAAAGGTCGAGGCACTGGCAGTGAATGTCGGCCAGCCCGGTGAGCCGGTGACCCTGTCGAT CCGCCCGGAGCGGGTGAGCCTCAACGGCGCAAGCGAACAATGTGTCAACCGCTTCTCAGGGAGGGTGGCGGAATTCATCTATCTGGGCGACCACGTCCGG GTTCGCCTGGAAGTCTGCGGCAAGAACGACTTCTTCGTGAAACAACCGATTGCCGAGCTCGACCCCGGGCTGGCCGTTGGGGACGTGGTTCCGCTTGGCT GGCAAGTCGAGCATGTGCGTGCGCTCGATCCCCTTCTAGAGGCGAATTGATCGCCCCCCTGCTGTACCAACACCAACCCTGCACGTGGAGAGAACAATAA
DNA Sequence for Gene
>CD58_RS25920
ATGTTGAGATCCCTGAAGTTCACAGCCCTGACACTGGGCATGATGGGTGCGGCAAGCGCGATGGCGGCGGGCCCGGACCTGACAGTGGTGTCTTTTGGCG GGGCGAACAAGGCGGCTCAGGTCAAAGCCTTTTACGCACCGTGGGAAGCGGCCGGCAACGGCAAGATCGTGGCTGGCGAGTACAACGGCGAAATGGCCAA GGTCAAGGCCATGGTCGACACCAAGAGCGTCTCCTGGGACCTGGTGGAAGTCGAGTCCCCGGAATTGTCCCGTGGTTGTGACGAAGACATGTTCGAGCAA CTGGATCCGGCCCTGTTCGGCAAGGCTGAAGACTACGTCAAGGGCGCCATCCAGCCTTGCGGCGTAGGCTTCTTCGTCTGGTCGACCGTGTTGGCCTACA ACGCCGACAAACTGAAAACCGCGCCGACCAGTTGGGCGGACTTCTGGGACACCAAGCAATTCCCGGGCAAGCGTGGCCTGCGCAAAGGCGCCAAGTACAC CCTGGAATTCGCCCTGATGGCCGACGGTGTCGCGCCGAAGGACGTCTACAAGGTACTGGCCGGCAAGGACGGCCAGGATCGCGCCTTCAAGAAGCTCGAC GAGCTCAAGCCGAACATCCAGTGGTGGGAAGCCGGCGCCCAGCCGCCGCAGTACCTGGCTTCCGGTGACGTGGTCATGAGCTCGGCCTACAACGGCCGGA TTGCCGCGGTACAGAAGGAAAGCAACCTGAAAGTGGTGTGGAACGGTGGTATCTACGACTTCGACGCCTGGGCCATCCCGCGCGGCCTGGACAAGACCCG TGCCGAAGCGGCGAAGAAATTCATCGCCTTCTCGGTAGCGCCGCAGCAGCAGAAGACCTACTCGGAAAACATCGCCTACGGCCCGGCCAACACCCAAGCC GTTCCGTTGCTGGCCAAGGATGTCCTCAAAGACATGCCGACCACCCCGGAAAACATCGCCAACCAGGTGCAGATCGACGTCAGCTTCTGGGCTGACAACG GTGAGCAACTGGAGCAGCGTTTCAACTCCTGGGCGGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAAGCGTTCATGAGTGGACGGGCTTTTGTGGCGAGGGAGCTTGCTCCCGCTTGAGTGCGCAGCACTCACAAAATTGGCGTTGCCGACAAAATTTTGGG GCCGCTTCGCAGCCCAGCGCGAGCAAGCTCGCTCGCCACAATGACCCGCCCGCCAGGTTGCGGTTTCAAAAGAACAGAGGCGGCCCGCCGCCCCTGTAAC GATCAAAAAGATTTGCGGAGTTCGCCATGGCCATCGCCGTTCCACTGAACGCGGGCACCAGCCCCACCCTGAAGCAGCGGCTCAAGCATGCCGAGCGGGT CAACCGCTGGAAGGCCCAGGCCTTGATCGCGCCGCTGGTGCTGTTTCTGTTGCTGGTGTTTCTGGTGCCAATCGTGGCGCTGCTATTCAAAAGCGTCAGC AACCCGGAAGTAGTCGGCGCCATGCCGCGCACCGTGGCTGCGGTCGCCGTGTGGGATGGACGTGGATTGCCGGGTGAACCGGTGTACAAGGCCGCCAGTG
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MLRSLKFTALTLGMMGAASAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGNGKIVAGEYNGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQ LDPALFGKAEDYVKGAIQPCGVGFFVWSTVLAYNADKLKTAPTSWADFWDTKQFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLAGKDGQDRAFKKLD ELKPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPRGLDKTRAEAAKKFIAFSVAPQQQKTYSENIAYGPANTQA VPLLAKDVLKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site