Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGGCTCATTGCACACGATTGCTCATTGTTCTCGTTGGCCTGCCGACAACCTGTCTAATCTCGATTGGAATTCAGGAGTTGCAATGCGCAAAGGTCCGTTG TGCCTGTTGTTGGTCACGTTGGCGATCGGGGCTCCCGCCCATGGTGAAGAGAGTACCGAGGGCAGTCATTCGGCGCCCTTGTCCCTGAGTGCCGGCAGCC ATATCGCCGAACTGCAGCAACGCTTGAAAGACAGCGAACGCCAGCGCGAAGAGCTGAGCAAACAATTGCAAAACGCCGATGGCGAACGTGAGAGCGCTTT GCTGGCCCGGTTGCGCCAGGAGAACCAGCGCCTGAAGCTGCAACTCAAGGAAGCCCAGGCCAGCCCCCTGCCACGCCTGTTGACCGATCAACAGCAGTGG TTCGTCATTGGCGGCGGGGTAGCGCTATTGGCCCTGCTCTGCGGTATCTTTGCCAGCGGTGGACGTAGACAACGTCGGCAATGGCTAAATTGAGTGAGTC
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DNA Sequence for Gene |
>CD58_RS22175
ATGAGCGAGCTGTTACTGATTGATGATGACCAGGAGCTGTGTGAGCTCCTCGGCAGCTGGCTGGGCCAGGAAGGTTTCCAGGTCCGCGCCTGCCACGACG GCCAGAGTGCTCGCAAAGCCCTGGCCGAAACCGCCCCGGCGGCGGTCGTACTGGATGTGATGCTGCCCGACGGCAGCGGCCTGGAACTGCTCAAGCAGTT GCGCAACGATCACCCGGAACTGCCGGTGCTGATGCTCTCGGCACGTGGCGAACCGCTGGACCGCATCCTTGGCCTGGAACTGGGGGCCGACGATTACCTG GCCAAGCCCTGCGACCCACGGGAACTGACCGCCCGCCTGCGCGCCGTCTTGCGCCGCAGTCACCCGGCGGCGGTGTCCAGCCAGATCGAGTTGGGGGACC TGACCTTCAGCCCGGTGCGTGGCGTGGTCAGCATCGATGAACAGGAACAGACCCTCACCGTTTCCGAAAGCCGCTTGCTCGAAGCGCTGCTCAAGCAACC GGGCGAGCCGCTGGACAAGCAGGAGCTGGCGCAGATCGCCCTGGGCCGCAAACTCACCCTGTACGACCGCAGCCTGGATATGCACGTGAGCAACCTGCGC AAGAAAATCGGCCCCCACCCCGACGGCCGTCCACGCATCGTGGCCCTGCGCAGCCGGGGTTATTACTACAGTCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCCACCAGTCCCCTGTGGCGAGGGAGCTTGCTCCCGCTCGGTTGCGCAGCGACCGCAAAATCATGGGGCCGCTTCGCAGCCCAGCGGGAGCAAGCTCC CTCGCCACCAGGTCACCCTATCTTCGGTACAACCGTTGTGCAGGCCTACTGGTTTGTAAGCACTCCACCAAACCGTCTTTACCCAAGCTTTACGCCCCGC TGACCGCCGCTGACCTTGATCTCCGTAATCTGCACACATCCGGAACTGACCGGGAATGAGACAAGGAGAGACCCCATGCGCAAGACCCTTATCGCTCTGA TGTTCGCTGCCGCCCTGCCTACCGTCGCCATGGCCATGCCCGAAGGCCCCGGCCCGATGGGCCCGATGGACGGCCCGCGCCACGGTGGGATGATGCACGA CAAAGGCCCCTTCAGCGAACTGGACCTGAGCCGCGAACAACGCCAGCAGATCCGCAAGATCATGGGCGAACAGCGCCACGAGCGCCGCGAACTGGTGGAG
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDQELCELLGSWLGQEGFQVRACHDGQSARKALAETAPAAVVLDVMLPDGSGLELLKQLRNDHPELPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPAAVSSQIELGDLTFSPVRGVVSIDEQEQTLTVSESRLLEALLKQPGEPLDKQELAQIALGRKLTLYDRSLDMHVSNLR KKIGPHPDGRPRIVALRSRGYYYSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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