Pseudomonas brassicacearum DF41, CD58_RS18865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.1010.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd11641
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046026 precorrin-4 C11-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd11641
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pbc00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc factor 430 biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pbc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc siroheme biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 2 206 1.2E-45
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 2 242 1.96E-68
NCBIfam TIGR01465 JCVI: precorrin-4 C(11)-methyltransferase IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase 3 247 3.0E-96
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 1 109 3.3E-30
PANTHER PTHR45790 SIROHEME SYNTHASE-RELATED - - 2 228 5.6E-60
CDD cd11641 Precorrin-4_C11-MT IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase 6 228 3.16762E-128
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 111 231 1.3E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.