Pseudomonas brassicacearum DF41, CD58_RS12015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas brassicacearum strain DF41, complete genome. [Details]
DNA Sequence Upstream of Gene
CACCAAGGAAGGCACGGCGGGCACGACCTGGGACCTGGCGGCCAACAAAATGACCAAGTGACGGAGCGCGCCCATGGCCGGCTTCGGGCTTCGCCCGCCT CTGTTCGATCGCCTGGCCAACCCGGCAGACGATTCGGGCCGGACGTTCGATCGCCAGGCGTTGCAGGACTCGGTCCATGCCGAACTGCAACGCCTGTTCA ATACCCGACGTGGCCCACGGGCACTGACCGAGCCCCCGAGCATCCTGGACTACGGCATCGCCGATTGGACCGCGTTGCAACAGCAGCGCAGCGATGACCG GCGCCAACTGACCCGGGAAATTCGCCAGGCCATCACCCACTTCGAACCTCGCCTGCGCTTGGGCGAGGTGCAGGTCAGCCCGGTACCGGGCCATCCGCAG CGACTGAGCATACGGCTGTTGGGCGAGTTGCGCGGCGACCTGCACGCATGGCCCGTGGCCTTTGTCATCGAGCACGCCGGCGACGGCCTTGAGGTACGAC
DNA Sequence for Gene
>CD58_RS12015
ATGAGCGACTCGATTGACCCGCAACTGCTGGACTATTACCAGCGCGAATTGACCTGGCTGCGGCATGCCGGAAGCCTGTTCGCCGAACGTTACCCCAAGG TCGCCAGGCGCCTGGAGTTGTCCCCCGGTGAATGCCCCGATCCGCACGTCGAGCGCCTTTTGGAAGGTTTCGCGCTGTTGGCCGCGCGCTTGCAACGCAG GCTCGATGACGATTACGCCGAGTTCAGCGACGCCCTGCTCGAACAGCTTTACCCACTGGCCATGCGCCCGCTGCCATCGTGCGCAATCGTGCAGTTCGAA CCCGACCCGAGCAAAGGCAACCTCAACGAGGGCTACCCGCTGCCCCGGGATACACCGCTGTTCGTCACCACCGACAAGGGCCAGAGCATTCATTTCCGCA CCACGGCCGCCGTGCACCTGTGGCCGATTGAAGTCAGCGAAGCGCTGCTGCTGGGCAGTGACGAGGCCCAGGCGCTGACCGGCGTAGTCCAGGCCCGCTC GGCCTTGCGCCTGAACCTGCGTTGCCTGGGGGAAAGCCAATGGTCGAGCCTGGGCATCGATCAACTGCGGGTGCACTTGGCGGCCTCACCGATGATCAAC GCCTGGCTGTACGACTTGCTGGGCGCCCATGCCGTCAAGGTCCTGGCCGGCCCGCCGGGTAGCGTGCCGGAGCCACTGGTGGGTTTGCCACACATCGTCG GTTTCGCCAGTGACGAAACCTTGCTGCCGGACGAAGACGGCGTACATCCCGGCATGCGCCTGCTGGCGGAGTACTTTGCCTTTCCCGACAAATTCGGCTT TTTCGACCTGCCACTGACCGGGGCCACCAGCGACAGCCCATCCTTGTACCTGTACATCGTGTTCGACCGTGCCCCCGCCAGCCGTCTACCACTGCAAGCC AGCGACATCGCCCTGGGCTGCGCGCCGGTGATCAACCTGTTCCCCAGGACCTCCGAGCCGCTGCGTCCGAACGGCACCCGCAGCGAATACCGGCTGGTGG CCGACAGTCATCGGGAAAACAGCGTCGAGATCCACAGCATCCGAGGCATGCGCGCCACGTCCAGCCAAGGCGTGCGCAAGGTGCCGGCCTATTACGGCAG CCAGCACGGCAGCGCCCAGCCGTGCTACTGGCATGCACGGCGGGTCAGCGGCATGAGCCCGAACCGGCTGGGCACCGATTTGATGGTCAGCCTGGTGGAT ACCCAGCTCGACCCGTTGGCCGAAACCGGGGACTACAGCCTCACAGCCGAACTGCTGTGCACCAACCGACACCTGGCCCAGAGCCTGCCGGCCGGCACCC CGCTGGGGTTCGAGCGTCCGGGGCCGGTGGCCTGGGCCCGCCTGCGCAACCCTCCCAGCCCCCAAAGCCTGCCGCGCCTGGACGGTGAGTCGCGCTGGCG GTTGGTGTCGCAATTGACGCTGAACCATTTATCACTGGTCGAAGGTCCCCAGGCGCTGGACGCGCTGCGCGAGATTCTCGAACTGCACAATTTGCGCGAC GAGGCCAGTGCCCGTCGCCAGATCGAAGGGGTATCGGGGCTGGGCTGCGAGCGCGTCATCGCCCACGTCGGCGAAGACGCCTGGCGTGGCTGGCGTAACG GGCTGGAAGTGCGCCTGCAACTGGATCCGCAGCATTTCGTCGGCAGCAGCGCCGTGCTGTTCTCCGGGGTACTGGCGCAGTTCTTTTCCCTTTATGCCAC CGCCAATCGCTTCGTGCGCACAGCGCTGGTTCAGTCCGACAAGGAGGTGAAAACATGGCAACCCCAAGCCGGCAAACCCCTGACGCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTGAGTCAACGGCTGCGGCGTGACCCACAACGCTTCGAATGGCTCCAGGCCTTATTGCTGCTGGAACGCGAACATCCCCAGGCCGAACCCTTGGGCAG CGGCACCGCGCCGCACGCCGAAGCCTTGCGCCTGCGCGGGCCGTTGACGCCGCTGTTCGCCGCCAGTGAAGTCGAAAGCCTGAGCCAGGAACCCGGTTCG CAACCGGTCCTGACCACGCCGATCTTTGGCCTCGGCGGCCCCGACGGTCCCCTACCCTACGCTTATCAGGAGTGGCTGCAACAACGGGCGCGGGCGCGGG ATCATGCGCCCGCGGAATTTCTCGATCTGTTCCAGCATCGCTTGCTCAGCCTGCTCTATAAGGTGATGCGCAAGCATCGCATCGCCCTGGGCTTCACCGC GCCTGGTGCCTCTGCGGTGCACGCGCAATTGCGAGCCCTGACCGGCCTGTTGCCCAAGGCTTTGCAGGAGCGCCAGGCCGCGCCTGATTCCGCCGTGCTG
Amino Acid Sequence
>type VI secretion system protein ImpG
MSDSIDPQLLDYYQRELTWLRHAGSLFAERYPKVARRLELSPGECPDPHVERLLEGFALLAARLQRRLDDDYAEFSDALLEQLYPLAMRPLPSCAIVQFE PDPSKGNLNEGYPLPRDTPLFVTTDKGQSIHFRTTAAVHLWPIEVSEALLLGSDEAQALTGVVQARSALRLNLRCLGESQWSSLGIDQLRVHLAASPMIN AWLYDLLGAHAVKVLAGPPGSVPEPLVGLPHIVGFASDETLLPDEDGVHPGMRLLAEYFAFPDKFGFFDLPLTGATSDSPSLYLYIVFDRAPASRLPLQA SDIALGCAPVINLFPRTSEPLRPNGTRSEYRLVADSHRENSVEIHSIRGMRATSSQGVRKVPAYYGSQHGSAQPCYWHARRVSGMSPNRLGTDLMVSLVD TQLDPLAETGDYSLTAELLCTNRHLAQSLPAGTPLGFERPGPVAWARLRNPPSPQSLPRLDGESRWRLVSQLTLNHLSLVEGPQALDALREILELHNLRD EASARRQIEGVSGLGCERVIAHVGEDAWRGWRNGLEVRLQLDPQHFVGSSAVLFSGVLAQFFSLYATANRFVRTALVQSDKEVKTWQPQAGKPLTL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site