Pseudomonas brassicacearum DF41, CD58_RS09065 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGAACCCGGCGCCGTTCTGCATGCTCGATGAAGTCGACGCACCGCTGGACGACGCTAACGTAGGCCGTTACGCACGGCTGGTGAAGGAAATGTCCGAAAC GGTGCAGTTCATCTACATCACCCACAACAAGATCGCCATGGAAATGGCCGATCAGCTGATGGGTGTGACCATGCATGAGCCGGGCTGCTCGCGACTGGTG GCGGTGGATGTGGAGGAGGCGATGGCCATGGTGGATGCCTGAAACACAGGCCGTAGGGCATGTACCTGGAGCGCTGTAGGTGTTTTTTACCCCTGGGCCT GTTGTCCAATCCACAGATTGGGCACAAGCCCATGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAGTTTAATGTCAATTTTTCGTATGCGTGGGCA AAACGCCATTCAGAACATAGAGTTGGCGCCACGTTTTAAAGCGGTTTGCAAATAGCTAAGCCCCTTATTTTTCAGCATTTTTATAGAGGCACGGGATTAC
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| DNA Sequence for Gene |
>CD58_RS09065
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATTATTGTCATTGCCGGTATTCTTTTCGACGGCTGGCGCCGCATGCGCGGTGGCAAGGGGA AACTGAAGTTTCGTCTTGATCGCAGCCTGTCGAACCTGCCGGACGACGACGGCAACGCCGAGTTGCTGGGCCCGCCCCGGGTGCTGGACACCCATAAGGA ACCGCAGTTGGACGAGCACGACCTGCCGTCGATGAGCGCGCCTGTGCGTGAGCCTCGGGAATCGGGTTCCAAGCGCGGCAAGCGCAACAGCGAGCCGTCC CAGGGCGACCTGAACCTCAATCTTGACCTGGACGGCGGCCCGAGCTTCAGCAGCCGCGACGACGATTTCCCGGACGATAACAAAACCTCGAACGCCGACA AAGACCAGGCCCAGGCCGAAGAAGTGCTGGTGATCAGCGTGATCTGCCGCGACCCGGCCGGCTTCAAGGGCCCGGCGTTGTTGCAGAACATCCTGGAAAG CGGCCTGCGCTTTGGCGAGATGGACATTTTCCACCGCCACGAAAGCATGGCCGGCAATGGTGAGGTGCTGTTCTCCATGGCCAACGCCGTCAAGCCAGGC GTGTTCGACCTGGACGACATCGACCACTTCAGCACCCCTGCCGTCAGTTTCTTCCTGGGCCTGCCAGGTCCACGTCATCCCAAGCAGGCTTTCGACGTGA TGGTGGCTGCCGCACGCAAGCTGTCCCAGGAGCTCAATGGCGAACTGAAGGATGACCAGCGCAGCGTGCTGACTGCCCAAACCATCGAGCATTACCGCCA GCGCATCGTCGAATTCGAACGCCGCGCGCTGACCCAGAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGATGGACGGCTCTCAAACCCAGAGAGCTTATGTGGCGAGGGAGCTTGCTCCCGCTGGGGTGCGAAGCACCCTATGTATCAAGAAAATCGAGCAGCCTA GGCTGCTCTTTTGCTTTATGAGAGAACACCCATGAACGCCGTCGAAACCCGCATCCAACAGCTGCGCACTGAGTTGGATCAGCATAACTACCGCTACCAC GTCCTCGACGAGCCGAGCATTCCGGACGCCGAATACGACCGCCTGTTCCACGAGCTCAAGGCCCTGGAAGAGCAGCATCCGGACTTGGTGACCAGCGATT CCCCGACCCAACGGGTCGGCAGCGTGGCACTGTCGGCGTTCAGCCAGGTGCGGCACGAGATCCCGATGCTCAGCCTGGGCAACGCCTTCGACGAAGTCAC TATGCGCGAGTTCGACCGCCGGGTAACCGAAGGCCTCGACTTGCCTGTCGGCGATCTATTGGGCGGTGGCGCGGCGGTGGAATACAGCTGCGAGCCGAAG
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSLSNLPDDDGNAELLGPPRVLDTHKEPQLDEHDLPSMSAPVREPRESGSKRGKRNSEPS QGDLNLNLDLDGGPSFSSRDDDFPDDNKTSNADKDQAQAEEVLVISVICRDPAGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMANAVKPG VFDLDDIDHFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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