Pseudomonas brassicacearum DF41, CD58_RS08500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGACTTGCACATCGGCATCACCGGCTGGATCTGCGATGAACGCCGGGGCACACACCTGCATCCCTTGGTGCGCGAAATTCCCCGCGGGCGGCTGATGCT CGAAAGCGACGCGCCGTACCTGCTGCCCCGCACGCTGCGGCCCAAGCCCAAGAATGGTCGCAACGAACCGGCTTATTTGCCGGAGGTTTTGCGCGAGGTG GCCTTGCACCGGGGCGAAACCCAGGAAGATCTTGCGGCCCATAGCACGGCGTGCGCCCGGGCGTTTTTTGGGTTGCCCAGTCTTTCCGAATAAACCCATA TCCCCTGTGGGAGCGGGCTTGCTCGCGAATGCAGTTTGTCAGCAAATACAGAGGTGACTGACCCACCGCATTCGCGAGCAAGCCCGCTCCCACAATGGGG CCGTGTCGTCTGTTGACCTACATCAACCCCCCGACACCGAAGTAGCAGCACAATACTGGCACCTTGCCAATGCTGTTTCCGCTATCAGAGAAAACCTTCC
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| DNA Sequence for Gene |
>CD58_RS08500
ATGGGTGCCTGGCTTAGCAATATCTCGCTGAAGTACAAATTCTGGGCGGTCAATGCGGTCGCCTTTGTCACCACCTTGTTGCTGGTGCTCTTCGCCGTGC AGCTCGAACAACAAGCACGCAACCACGCTGCTCAGGCGAACGCCCAGGCCCAGGCGCGCTTGCTCGAGGCGTGGCCTGCCGGGCAACCGTTGCCCAAGGC CGATCATCTGCTGGGATTCCATCGCGAACAGATCCCCGCTTTCAATAATCAAGCATTGCCCTCACTGGCGCACGCCGATGGCTGGGTCGAGCTCAATGCC AAGCCGCTGCTCGGCGACGATCCACTGCTGGGTGCTGAAGTGATCCGGCGAGGCGACGACCAACGGCTCGCGGTACTCGCCCATGGCGCGAGCCTGGGCC AAGTGTTTGGCGAGCGCTTCAGCCAATACGCTATGGCGGTGTTCGTGCTGATGTTGGCAATGCTGGGGGCCTCGCAGCTGTTGATCCGTTTTCTGCTCAG CCAGCTGAACACCCTGAAGGACGTGATGCTGCACGTGGAAAAAACCGGTGACTTGTCCGCCCGCGTGCCCCTGGCCTGCAGGGACGAAGTAGGTCAGATG GCCGCCGCGTTCAACGCCATGCAGGCTGGTTATCAGCGCGTGGTCGACACGGTCGCCACCACTGCCCGGCAACTGGACAGTGGTGCGGCGCGCCTGGCAT CGAGCATGAACGATGTTCGCCGCGGCATGCTCGGCCAGCAGAGCGAGACTGATCAGGCGGCCACGGCGATCAACGAAATGTCCGCCACGGTTTATCACAT CGCCCAGCATGCCGGCGCCACCCGCGACCTGTCGAAAACCGCCGACACCCTGGCCGGCAACGGCCGCGAAGTGGTCAGCCGCGTGCAACAGTCGATCACC GGGCTGTCCTCGGGCGTACAACAGACCGCCGAAATGATCGGGCGCTTGGCCGAAGACAGCCAGAAAATCAATGGCGTGGTCAGCGTGATCCACAGCATTG CCGAGCAAACCAACCTGCTGGCCCTCAACGCAGCCATCGAAGCAGCACGGGCCGGGGAAATGGGCCGCGGTTTTGCCGTGGTGGCTGACGAGGTACGCAA CCTGGCCAAGCGAGTACAGAGTTCCACGGATGAAATCACCACCATGATCGCGGCCCTGCAAGCCGGAACCCGGGACGCGGTGGATTTCATGCAGGAGAGT TCGAACAAGGCCGACGACTGCGTGCAACAGGCCCGCGAGGCCGGCGAGGCCCTGGAGCAGATCACCGGTGCGGTGGCGCAGATGCGTGAGAGCAACACCC AGATTGCGGTCGCGGCCGAACAGCAGAGCCAGGTCGCCGAAGAGATGAATCGGGCAGTGGTGAGTATTCGCGACGTGACCGAAAACACCGTACGCCAGAC GGTGGACTCAGCCACTACCAGCCATGAATTGGCGACGTTGGCGGGCGAGCTGAGCAAGGCGATCGGGCAACTCAAGCTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATACCGACCCGCTCAAGTCCTGTGGCGAGGGAGCTTGCTCCCGCTGGGGCGCGCAGCGCCCCCCAGAAAAGCCCCCCAATCAATCTGATACACCGGGGT TACCGTTTGGGGCCGCTTCGCGGCCCAGCGGGAGCAAGCTCCCTCGCCACAAAAGCAACTCATCGCTGCACAGGGGAAAAGGCTATGGCCACCTATCGCG CCCATAGCCAACCGCGATTCGCCGCCCCGCCCGGGCAAGCCTATTCTTGGGTCATTCAGTGTCATGAACTCAAGGATCCGCATCATGGGCAAACGTCACC CCAATCTTCCGGCCTGGCAATGGCGCGCCGATCCTGCCCTCCACCGTCACCCGACCAATCAGGTATTGCACCTGATGGCGGTGCCACTGTTCATCATTGC GTTTCTGTTAATGGTGTCAGGCGTGTTCAGCTTGAATCCGGCCGACGTCGCCATCGGCATCATCGGCGTGGTCGCGGCACTCGGGTTGCAGCGCCACGGT
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| Amino Acid Sequence |
>chemotaxis protein
MGAWLSNISLKYKFWAVNAVAFVTTLLLVLFAVQLEQQARNHAAQANAQAQARLLEAWPAGQPLPKADHLLGFHREQIPAFNNQALPSLAHADGWVELNA KPLLGDDPLLGAEVIRRGDDQRLAVLAHGASLGQVFGERFSQYAMAVFVLMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLACRDEVGQM AAAFNAMQAGYQRVVDTVATTARQLDSGAARLASSMNDVRRGMLGQQSETDQAATAINEMSATVYHIAQHAGATRDLSKTADTLAGNGREVVSRVQQSIT GLSSGVQQTAEMIGRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSSTDEITTMIAALQAGTRDAVDFMQES SNKADDCVQQAREAGEALEQITGAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTENTVRQTVDSATTSHELATLAGELSKAIGQLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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