Pseudomonas brassicacearum DF41, CD58_RS07225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TAACGTCCTGTGCCGCGCCAGCCATGAAAATCGCTGTGCCGTCGTAACCTCACGCCTGACCCGTCATGGCGAATGCAGTGCGCTCGTGCTCGAAATCTCC GGCAGCTGGGACGCCCTGGCTCGCCTGGAAGGCAGCCTGTCATTGCTGGCCAAGAAGCACGCCTTCACCGTCAACGTGGTGCGCAGCGCCGCCCTGGAGA ACCGTCCCCAGGCCCTGCCCTACGTGGCCTATGTGAGCTCGGCCTACCGGCCGGACATCATCAACGAGCTGTGCCAGTTTTTCATGGACCACCAGGTCGA GCTGGAAAACCTGACATGCGACACCTACCAGGCTCCGCAGACCGGCGGCACCATGCTCAATGCCACGTTCACCGTAACCCTGCCGGCCGGCACCCAGATC AGTTGGCTGCGCGATCAGTTCCTGGACTTCGCCGATGCGATGAACCTCGACGCACTGATCGAACCGTGGCGCCCACAAAACCCAATGTAAGGAAGCGTTC
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| DNA Sequence for Gene |
>CD58_RS07225
ATGGCCGTTGCCGTCGACCAGCCGGTTACCGATTTCCAGGCGTCCGCCACCAGCGGACAGACCGTCAGCCTCGCTGGCCTCAAAGGCAAGCAGGTGGTGA TTTACTTCTACCCCAAGGACAGCACCCCTGGCTGCACCACCGAAGGCCAGGGCTTTCGTGACCAGTACGCGCAGTTCAAGGCCGCCAATACCGAAGTGTT CGGCGTCTCCCGCGACAGCCTCAAGTCCCACGAGAACTTCAAGTGCAAGCAGGAGTTTCCGTTCGAGCTGATCAGCGACAAGGACGAAGCCGTCTGCCAG CTGTTCGACGTGATCAAGCTGAAAAAGCTTTATGGCAAGGAATACCTGGGCGTTGATCGCAGCACGTTCCTGATCGACAAGAACGGCGTACTGCGCCAGG AATGGCGTGGTGTGAAGGTGCCTGGGCATGTGGATGCGGTGTTGGCGGCGGCTCAGGCGCTGAACAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATTTTTCGTTGCCTGTCCTGGCGCCATCGCGAGCAAGCTCGCTCCCACATGGGATCTGTGATGTTCAATAGAACCCTGTGGGAGCGAGCTTGCTCGCGA TGAGGCCATCAGCCCAACCGATGAATCAGCTACAACAACGGCGCCACCACCGGCTCCTTGCTCGGCCACGCATCCAGCACCGCCTTGAACAGCGTTGCCA GGGGAATCGCAAAGAACACGCCCCAGAATCCCCACAACCCGCCGAATAACAACACTGCGCAGATAATCGCCACCGGATGCAGGTTCACCGCCTCGGAGAA CAGCAGCGGTACCAACACGTTGCCGTCCAGCGTCTGGATGATCCCGTAGACCGCCATCAGATAAATGAACTGGTCGCCCCAGCCCCACTGGAACAGCGCA ATCAACGCCACGGGCACGGTCACCACCACCGTACCGACGTAGGGCACCACCACCGAAATACCCACCAGCAACGCCAGCAGCGCGGCGTAGTTGAGCCCCA
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| Amino Acid Sequence |
>peroxiredoxin
MAVAVDQPVTDFQASATSGQTVSLAGLKGKQVVIYFYPKDSTPGCTTEGQGFRDQYAQFKAANTEVFGVSRDSLKSHENFKCKQEFPFELISDKDEAVCQ LFDVIKLKKLYGKEYLGVDRSTFLIDKNGVLRQEWRGVKVPGHVDAVLAAAQALNKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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