Pseudomonas brassicacearum DF41, CD58_RS06875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas brassicacearum strain DF41, complete genome. [Details]
DNA Sequence Upstream of Gene
CCGGCGACAACGCCGCCATGGTCAAGCTGACCCTGGAAGACGGCAGCCAGTACCCACATGAAGGCAAGCTGGAGTTCTCGGAAGTGTCTGTCGACCAGAC CACCGGTTCCGTGACCTTGCGCGCCGTGTTCCCCAACCCGGACCACACCCTGCTGCCGGGCATGTTCGTCCACGCACAATTGCAAGCCGGTGTGAACAGC GCGGCCATCCTGGCGCCGCAACAAGGCGTGACTCGTGACCTCAAAGGCGCGCCAACCGCCCTGGTGGTAGGCCCTGACAACAAGGTCGAACTGCGTCAAC TCAAGGCCAGCCGTACCGTCGGCAGCCAGTGGCTGATCGAAGACGGGCTCAAGGCCGGCGATCGCCTGATCACCGAAGGGTTGCAGTACGTACGGCCAGG CGTGGAAGTCAAAGCCACTGAAGCCACTAACGTTGGCGCTAAGAACCCGGCCCCCGCTCAGGCAGCTGATAAAGCAGCCGGCGGCAAAGGGGAGTAAACC
DNA Sequence for Gene
>CD58_RS06875
ATGTCGAAATTTTTTATCGACCGTCCGATTTTCGCCTGGGTGATCGCCCTGGTGATCATGTTGGTCGGGGCTCTATCGATCCTCAAATTGCCGATCAACC AGTACCCGAGCATCGCACCACCGGCCATTGCCATCCAAGTGACCTACCCGGGTGCGTCCGCGCAAACCGTGCAGGACACTGTGGTGCAGGTCATCGAGCA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCCTCGGAAAGTAACTCCGACGGCAGCATGACCATCACCGCGACCTTCGAGCAGGGCACCAGCTCT GATACCGCGCAGGTCCAGGTCCAGAACAAGCTGAACCTGGCTACCCCGCTGCTGCCGCAAGAAGTGCAGCAACAGGGCATCCGCGTGACCAAGTCAGTGA AGAACTTCCTGATGGTGATCGGCGTGGTGTCGCGCGACGGCAGCATGACCAAGGACGACCTGTCCAACTACATCGTGTCCAACATGCAGGACCCCATATC GCGCACCGCCGGTGTCGGTGACTTCCAGGTTTTCGGTGCCCAGTACGCGATGCGGATCTGGCTCGACCCGGCCAAGTTGAACAACTTCAACCTGACCCCG GTGGACGTGAAAAACGCCATCGCCGCGCAGAACGTCCAGGTCTCGTCCGGCCAGCTCGGCGGCCTGCCTGCCCTGCCCGGCCAGCAACTGAACGCCACCA TCATCGGCAAGACCCGTTTACAGACCGCAGAGCAGTTCAAGGCGATTTTGCTCAAGGTCAATCCGGACGGCTCACAAGTGCGCGTCGGCGATGTCGCCGA TGTCGGCCTGGGCGGTGAGAACTACAGCGTCAGTGCCCAGTTCAACGGCGCCCCGGCTTCGGGCCTGGCGGTAAAACTGGCCAACGGCGCCAACGCCCTC GACACGGCCAAGGCCCTGCGCAAGACCATCGACGACCTCAAGCCGTTCTTTCCGCAAGGCATGGAAGTGGTGTTTCCGTACGACACGACGCCAGTGGTGA GTGAATCGATCAAGGGGGTGGTTGAAACCCTGGTCGAAGCAGTCGTACTGGTGTTCTTGGTGATGTTCCTGTTCCTGCAGAACTTCCGCGCCACCATCAT CACCACGATGACCGTGCCGGTGGTACTGCTGGGTACCTTCGGGATCCTTGCCGCGTTCGGTTTCAGCATCAACACCCTGACCATGTTCGGCATGGTGCTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAACGGGTGATGAGCGAAGAAGGCCTGTCGCCCAAGGAAGCCACCAAGAAAT CCATGGGCCAGATCCAAGGTGCCCTGGTGGGTATCGCCCTGGTGCTTTCGGCGGTGCTGCTGCCGATGGCGTTCTTCGGCGGTTCCACCGGTGTGATCTA CAAGCAGTTCTCCATCACCATCGTCTCGGCCATGGCCCTGTCGGTCATGGTGGCGCTGATCTTCACCCCGGCACTGTGCGCCACCATGCTCAAGCCGATT CCGAAAGGTGAGCATGGCACGCCGAAACGCGGCTTCTTCGGCTGGTTCAACCGCACCTTCGACCGTGGCGTCAGGAGCTACGAGCGCGGCGTGGGCAACA TGCTCAAGCACAAGGCCCCGTACCTGCTGGCCTACATCATCATCGTGGTCGGCATGGTCTGGCTGTTCACCCGGATTCCAACGGCGTTCCTGCCGGAAGA AGACCAGGGCGTGTTGTTTGCCCAGGTGCAGACACCGGCCGGTTCCAGTGCCGAACGCACCCAGGCGGTGGTGGACAAGATGCGTGAGTTCCTGCTGCGT CCGAGCAAGGACGGCGGTGAAGGCGATGCCGTGGCCTCGGTATTCACCGTGACCGGCTTCAACTTCGCCGGTCGCGGCCAAAGCTCCGGCATGGCGTTCA TCATGCTCAGGCCGTGGGACGAACGTAACGCCGACAACAGCGTGTTCAAGCTCGCGGCTCGCGCCCAGCAGCACTTCTTCACCTTCCGTGACGCGATGGT GTTCGCCTTCGCTCCGCCAGCGGTGCTGGAACTGGGTAACGCCACCGGTTTCGATGTGTTCCTGCAGGACCGCGCCGGCATTGGCCACGAGAAGTTGATG GAGGCACGTAACCAGTTCCTGGGCATGGCTTCCCAGAGCAAGATCCTGTCCCAGGTGCGTCCGAACGGTCTTAACGATGAGCCGCAATACCAATTGGAAA TCGATGACGAGAAAGCCAGCGCACTGGGCATTACCCTCTCGGACATCAACAACACCTTGTCGATTGCCTTGGGCAGTAGCTATGTGAACGACTTCATCGA CCGTGGTCGGGTGAAGAAGGTGTACGTGCAAGGTCAGCCAGGTGCTCGCATGAGCCCCGAAGACCTGAAGAAGTGGTACGTGCGCAATAGCGCCGGGACG ATGGTGCCGTTCACCGCATTCGCCAAGGGCGACTGGGTCTACGGCTCACCGAAGCTGGCTCGATACAACGGTGTGGAAGCCATGGAAGTCCTCGGTACTC CGGCTCCGGGTTATTCCACCGGTGAGGCCATGGCCGAAGTCGAAGCCATTGCCAAGAAGCTGCCGGCCGGTGTGGGTATTTCCTGGACAGGGTTGTCCTA TGAGGAACGTCTGTCGGGCTCCCAGGCACCCGCGTTGTACGCCTTGTCGCTGCTGATGGTATTCCTGTGCCTGGCGGCGCTGTATGAAAGCTGGTCGATC CCGATCGCGGTCATGCTCGTGGTGCCGCTGGGGATCATCGGTGCCTTGATGGCCACCAGCCTGCGTGGTCTGTCCAACGACGTGTACTTCCAGGTGGGGC TGTTGACGACCATCGGCCTGGCGGCGAAAAACGCCATTCTGATCGTGGAATTCGCCAAGGAACTCCACGAACAGGGCCGAACGCTGGTGGAAGCTGCCAT CGAAGCCTGTAGGATGCGTCTGCGGCCGATTATCATGACGTCCCTGGCGTTCGTGCTCGGCGTGGTCCCGCTGGCGATCTCCACCGGCGCCGGCTCGGGT AGCCAGCACGCCATCGGTACCGGTGTGATCGGCGGTATGTTGACCGCTACGATTCTGGCAATCTTCTGGGTTCCCCTGTTCTTTGTGACTGTGTCGTCGA TAGGTCGCCGCAAGAATGCCGACCAGGACGATACTCCTGAAACTTCTAAAGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTCCTCTCCCTGACCATCGCCGCCGTCGTGCTCAGCGGTTGCTCGCTGATCCCCGACTATCAGCGGCCCGACGCACCGGTCGCGGCGCAATA CCCGCAAGGCCCGGCCTACGAGTCGGCCAACGCGCCTGGCCAGGCCGCCGCCGAGCAGGGCTGGAAACAGTTTTTCCATGACCCGGCGCTGCAACAGTTG ATCCAGGTGGCCCTGGAAAACAACCGCGACCTGCGCGTCGCGGCGCTGAACATCGACGCCTACGCCGCGCAGTACCGCATTCAGCGGGCAGACCTGTTCC CGGCGGTCTCGGCTACCGGTTCCGGCAGTCGCCAGCGCGTGCCGGCCCGGGCTTCGCAAACCGGTGAAGCGGCCATCAGCAGTTCCTACTCGGCCACCCT GGGCATCAGCGCCTATGAGCTGGACTTGTTCGGTCGGGTTCGCAGCCTGAGCGAGCAAGCGCTGCAAAGCTACTTCGCCACCGAAGAAGCCCGCCGCAGC
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIQVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTSS DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKSVKNFLMVIGVVSRDGSMTKDDLSNYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNNFNLTP VDVKNAIAAQNVQVSSGQLGGLPALPGQQLNATIIGKTRLQTAEQFKAILLKVNPDGSQVRVGDVADVGLGGENYSVSAQFNGAPASGLAVKLANGANAL DTAKALRKTIDDLKPFFPQGMEVVFPYDTTPVVSESIKGVVETLVEAVVLVFLVMFLFLQNFRATIITTMTVPVVLLGTFGILAAFGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMALSVMVALIFTPALCATMLKPI PKGEHGTPKRGFFGWFNRTFDRGVRSYERGVGNMLKHKAPYLLAYIIIVVGMVWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQAVVDKMREFLLR PSKDGGEGDAVASVFTVTGFNFAGRGQSSGMAFIMLRPWDERNADNSVFKLAARAQQHFFTFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHEKLM EARNQFLGMASQSKILSQVRPNGLNDEPQYQLEIDDEKASALGITLSDINNTLSIALGSSYVNDFIDRGRVKKVYVQGQPGARMSPEDLKKWYVRNSAGT MVPFTAFAKGDWVYGSPKLARYNGVEAMEVLGTPAPGYSTGEAMAEVEAIAKKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSI PIAVMLVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGRTLVEAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSG SQHAIGTGVIGGMLTATILAIFWVPLFFVTVSSIGRRKNADQDDTPETSKEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site