Pseudomonas brassicacearum DF41, CD58_RS02440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum strain DF41, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCACGCCGGAAGAACTGTCCAAGAAGTTTCGCTACAACCAGCGCCGTGAGCTACGGTTGCTGGAAGAGGCGGGCGGGCTGGTGCGACCGGTCGGCGAGT TTTCCAGCGCGGAACTGGCCTCGATCTACTGCGACCTGTTCCTGCGCCGTTGGGGCTTTGCGGCCACCGGTGCCGAGCGCATGGGCGAGGTGATCGAGCT GCTGCGCGAATGGCTGATCGGTTCGGTGATCTTTCTCAACGATGCGCCGATTGCCATTCAACTGGTGTATCGGGTCGAAGCGCCCGAGTGGATCAGCGTC GAGTACATCAACGGCGGCGTCGATCCGCAGACCCGCGAATTCAGCCCTGGTAGCGTATTGAGCTTTCTCAACACCCAAAGCGCCTGGGAGCAGGCCCGTG CCGCCGGCAAACCGTTGCGTTTTTCCTTCGGTCGGGCGGACCGGGAGTACAAGGACCGTTGGTGCAACCCCGTGCCGGTGTTTACCGTATGAATTCGCCC
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| DNA Sequence for Gene |
>CD58_RS02440
GTGAGTCGCAAGCAACAGTTGCTCAAGCGTCACCGTCGCAACAAGCGCATGGGGCTGTTGTTCGCCCTCGTTGTGCTGGTCATGCTGGGTGTCGCGGTGG CCTGGTGGCTGCCCCTGGTGCTTGCGGTCCTGGGCTGGGTCGCCCACGAGGCGTGGTTCGCCGATCATCTGTTCTATTCGCCCAAGGACGACTATCAATA CAGCTTCCCGCCGTTCACTCAGCAACCCAAGGTGCATTTGCATGCCGGGCGACTGCGATTGGACGAAGGCGTGATGGTGGACGATGGCGCTACGCTGATC CTCGCGCTGCGGGTCAAAAGTACCTGGCTAGGGCGTTTCATCGATCCACTCGTCGAGTTGTCGGGCGGTGAACATCTGGATCGACAAACTTTCGAGCGTG GCGTCAACGGCCTGCGCTATCTCAATCTCAGCGAGCAGGGCGACGTGCTGTCCCGGGGTGACCTGCACCTGCGCGGGCGCTTCTGTCGCTTGCTGGGCGA GCCGATGCTTTGGTCGTTCGCGCCCGTGGAGGTGCAGCGTCAGCGGGTGATGGTCATCGCACCCCATGCCGACGATGCGGAGCTGGCCGCCTACGGGTTA TACAGCCAGGCCGATGAAGCCTGGATCGTGACGTTGACGGCGGGTGAAATTGAAGCCGAGCATTATCGGCGGATGGGCCTGGACGGCGTCGAAGCCGCGC GGCTCAAGGGGCGTTTGCGAGCGTGGGACAGTATCGCCGTGCCACGCTGGGCTGGGGTACCTGAAGCCCATTGTGTTCAGCTGGGGTACTTCTGCCTGCA ATTGGCTGCCATGCAAGCCGCGCCCAGCCAGCCACAGGGTTCTCGCGAGGCGGACCTGAGCGATACCCGGCTGTTTCGCCAGATGAATCCGTTTGCCCTG CCCGGTGACGTCGACGGTGCGCCGACCTGGAACAACCTGCTGGCAGACCTGCGCGAGCTGCTGCTCAAGGCGCGCCCCGAGGTGATTGTCCTGCCGCACC CGACGCTTGACCCGCACCCCGATCATGTCTGTGCACATCGCGCAGTCATGCAAGCTCTCGCGGGCCTGGAGTGGCAGCCCACCACGCTGCTGGGTTATGC CAATCACCTACACGACAATGACCGCTGGCCCATGGGCGATGCGGGAGAGGGTGTCGCGTTGCCACCGGTTTTCGATCCGGATCGGTCGATGCACCCTCTG AGCCTGCCACTGTCGTTGACGATCCAGCGGGACAAGGCCATGGCGCTGGGGATGATGCATGATCTGCAACCGCCTGCGCCATTGAAGCGGCGGTTGAGGC GATTGATACAGTGCCTTATGACCAGTAGAGTGAGGTCCGTCTACGGCGAGAACGATTTTTTCCGCAAGGCAGTCAGGCGGCACGAACTTCTCTGGCAATT GAAACCTTCTGAAGCACAAATAAAACATAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCATAACGGGCCCCAGCGTCCTCGTCCTTAGTGAATGTGAGCTTGTTGTGATCAATCCTTGCCCGCGTATTCTTTTTGTCATTCCCTATTTCGGACGTT GGCCTTTCTGGATGCCGTTGTTTCTCGAAAGCTGTCGGCGTAACGCCGATATCGATTGGCTGTTATTCAGTGATTGTGGCGTACCGGAAAATCTCCCGCC TAACGTGACTGTCGAAACCACGACGTTCGAAGCCTATTGCCAGCTGGTTTCCCAGCGGCTGGGCATCGATTTCAAGCCAACCCAGGCCTACAAGCTGTGT GATATCAAACCTGCCCTAGGGTACATTCATGCCGACCGTCTCGAAGGCTACGATTTTTGGGCCTTTGGCGATATTGACCTGGTGTATGGCGATCTTCGGC AATATTTCACCGCCGAACGCCTGGCCCGTTATGACTTGTTTTCAACCCACGAACGACGTGTCGCCGGGCATTTGTGCTTGATGCGCAACACCGCGCGCAC
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRMGLLFALVVLVMLGVAVAWWLPLVLAVLGWVAHEAWFADHLFYSPKDDYQYSFPPFTQQPKVHLHAGRLRLDEGVMVDDGATLI LALRVKSTWLGRFIDPLVELSGGEHLDRQTFERGVNGLRYLNLSEQGDVLSRGDLHLRGRFCRLLGEPMLWSFAPVEVQRQRVMVIAPHADDAELAAYGL YSQADEAWIVTLTAGEIEAEHYRRMGLDGVEAARLKGRLRAWDSIAVPRWAGVPEAHCVQLGYFCLQLAAMQAAPSQPQGSREADLSDTRLFRQMNPFAL PGDVDGAPTWNNLLADLRELLLKARPEVIVLPHPTLDPHPDHVCAHRAVMQALAGLEWQPTTLLGYANHLHDNDRWPMGDAGEGVALPPVFDPDRSMHPL SLPLSLTIQRDKAMALGMMHDLQPPAPLKRRLRRLIQCLMTSRVRSVYGENDFFRKAVRRHELLWQLKPSEAQIKHK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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